Gene
| Gene Model ID | pfu_aug1.0_11.1_50548 |
|---|---|
| Locus | scaffold11.1 : 108578 ... 117575 : - |
| To GenomeBrowser | scaffold11.1:108578..117575 |
| Genes list of scaffold | scaffold11.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11.1_50548.t1 | 2 | 1 | Fringe | 124 | 251 | 7.1e-21 | 74.5 | 1.2e-24 | 8.6e-21 | 74.2 |
| pfu_aug1.0_11.1_50548.t1 | 2 | 2 | Fringe | 278 | 305 | 7.1e-21 | 74.5 | 0.23 | 1700.0 | -2.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11.1_50548.t1 | gi|118343806|ref|NP_001071719.1| | Fringe [Ciona intestinalis] | 6.0e-15 |
Transcript
| Transcript ID | pfu_aug1.0_11.1_50548.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11.1_50548.t1 atgcaccatttggtgctctattgagttcagtggaatagttccacctctagcttgctagggtccgtcgatgctcaattatg tgttcttttgttctgttctgcaaagaggaaacacttttcacaaagaatacgaaacaatagtcttttgtatcctttactac tggtcaattcaataacaatgtgctgtcgaattgaaaggatacgaaccagactttccgtattcattatcagctctttgatg atatgggtaatttttatcagtaatgaagattccgtcaaagaagtatttaacgaacgggaaatatctcgtgagttgaggga cgacaattttggaaacattcaaaacacgacagatgagagaccattcaacaaaataacattacaagatatcgtaatgaccg ttaggacaacaacgaaaaattccgaaacaagaatgaaagctttatttgagtcatggttaccatccgcctttgataagaca ccagacatcacatcatttggcaaaatttctaattgtgacgtcatatttgatcgcactgactttatgcgttgtcatgtttt ctattatgacgtcatgaaaaaggacctctgctgcaaaatgtccaaggaattgacattttttacgggaattgataagaagt ggtattgcctattcgatgacgatatgtacctcaatgttgacaatttagtaacattgctgagagactatgattataatggt ttgtggtacatcgggaaaaatgacagagagacaaagccacattacattccaagacaaaaatataaaggtaccaagattaa atcaaaagacatatttacgttttaccttttatcagatactttccaaaatgatacccgaatctatgtaccaaaagcgtatt ctataagagagcttgaatataccaaaacaatgaaaaatgttgatactatcaaaattaccccatga |
|
Protein
| Protein ID | pfu_aug1.0_11.1_50548.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11.1_50548.t1 MHHLVLYXVQWNSSTSSLLGSVDAQLCVLLFCSAKRKHFSQRIRNNSLLYPLLLVNSITMCCRIERIRTRLSVFIISSLM IWVIFISNEDSVKEVFNEREISRELRDDNFGNIQNTTDERPFNKITLQDIVMTVRTTTKNSETRMKALFESWLPSAFDKT PDITSFGKISNCDVIFDRTDFMRCHVFYYDVMKKDLCCKMSKELTFFTGIDKKWYCLFDDDMYLNVDNLVTLLRDYDYNG LWYIGKNDRETKPHYIPRQKYKGTKIKSKDIFTFYLLSDTFQNDTRIYVPKAYSIRELEYTKTMKNVDTIKITP |
|