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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_11023.1_60846
Locus scaffold11023.1 : 1 ... 16533 : +
To GenomeBrowser scaffold11023.1:1..16533
Genes list of scaffold scaffold11023.1
Synonym pfu_aug2.0_807.1_24426

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_11023.1_60846.t1 2 1 Myotub-related 5 33 2.1e-26 92.5 9.2e-05 1.4 7.6
pfu_aug1.0_11023.1_60846.t1 2 2 Myotub-related 36 167 2.1e-26 92.5 9.7e-28 1.4e-23 83.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_11023.1_60846.t1 gi|157105011|ref|XP_001648675.1| AAEL000564-PA [Aedes aegypti] 3.0e-37

Transcript
Transcript IDpfu_aug1.0_11023.1_60846.t1
Definition-
>pfu_aug1.0_11023.1_60846.t1
atgacaatgtaaagtacagctttggcaaagaagttgacagactgaagtttgacttgaagagtaccaaagcttggaggatc
acatatattaatgaagaatttggagatcagaggaatggtgctgtgttagtacgatgcagtcagccagagctgggatggtt
taactggcgtaacacagaggacgagaagttactagcggcagtgtctgaggcgtgtaacagtaatcctggtacttatcaca
aactatcgtcactcagcgaggactctgcctcctcatcagagaatagctcacaaaatggagatatcacagatgataggacc
cagaagaagatgtttatcatggattgtagatcctacggagcagcattcgctaaccgtgttaaggggggaggagtggagtg
tccggagtattaccctagctgtgagatacagttcatgaaccttgccaacattcataccattaggaagtcctttatagcat
tacgtacactgtgtagtgggggaatggaccaggctagattaagcttgtacagcatacttattcccatttgttcggcacat
tcctgtgtaattccacacaagaacgtctgcgagcggagctggacaaacacacggcttctgtatggtcgttacttcatccc
tctaacaaacagttccataataacctgtatagtccaacattggaacaacagcgacaccttgcacttcaagcatattaata
actttgctacttacatacatgtacgagcagatatccaactggcaaactacagtgtttttagccgagttgcaaaactcggc
tcttaa

Protein
Protein IDpfu_aug1.0_11023.1_60846.t1
Definition-
>pfu_aug1.0_11023.1_60846.t1
DNVKYSFGKEVDRLKFDLKSTKAWRITYINEEFGDQRNGAVLVRCSQPELGWFNWRNTEDEKLLAAVSEACNSNPGTYHK
LSSLSEDSASSSENSSQNGDITDDRTQKKMFIMDCRSYGAAFANRVKGGGVECPEYYPSCEIQFMNLANIHTIRKSFIAL
RTLCSGGMDQARLSLYSILIPICSAHSCVIPHKNVCERSWTNTRLLYGRYFIPLTNSSIITCIVQHWNNSDTLHFKHINN
FATYIHVRADIQLANYSVFSRVAKLGS

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