Gene
| Gene Model ID | pfu_aug1.0_11033.1_03012 |
|---|---|
| Locus | scaffold11033.1 : 9996 ... 17557 : + |
| To GenomeBrowser | scaffold11033.1:9996..17557 |
| Genes list of scaffold | scaffold11033.1 |
| Synonym | pfu_aug2.0_5316.1_22663 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11033.1_03012.t2 | 1 | 1 | RVT_1 | 336 | 492 | 2.2e-20 | 72.9 | 1.5e-23 | 4.4e-20 | 71.9 |
Transcript
| Transcript ID | pfu_aug1.0_11033.1_03012.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11033.1_03012.t1 atgtccattcttaaagagctttggacaaaagaagtcaatgatccggaagtgaaatcgacatatgaatatgttgttgacct tcgagaaagacttgaatctacatgtcaacttgcaaaacaaaatcttgaaaaagcatctaaaaggtataaaactttgtaca ataggaaggcaaaaggccgaaatatgaaggtaggtgagaaagttttggtcctcctccctacagacaacaacaaactgttg atgcagtggaaaggaccgttctcaattgtagccaaggttaacaatgttgattaccgcatcgatgtcaacggtaagataaa aacgtttcatgctaacatgttaaaacattacctagagcgggtgggtatgttagtagacagttctgaatcagttcctacaa tgaacgccgtgatgattgattgtaccactgatgaacaaggtgagttacacgatcttccttatgtcaaaccaaaagaaggt cctacagatgtagatatgaattcaaagttgaatgacgatcaaaagttgaaagtcatgaatctccttgaacaattttcaga tatattgacagatctacctggtcagactaatttgataagtcatgacatacgactgacaagtgatcaccctgttaagatga agtcgagacctattccattcggaatgaatgacattgtgaacgaagaagttcagaacatgctacttctcaaggtcattgaa ccatcaaccagtgcgtactgttctccaattgttttggtgaagaaaaaagatggtagcatacgattttgtatcgattttcg agcactgaacaaccaaacttacttcgatgcagaaccaatgcccgattcagaagaaatttattccaaacttgcaacacata aatggttttcaaaacttgatttgtcgaaaggttactggcaggttcctcttgaagagtcatcaaaaccacttacagccttt caaacacctaaaggtctttttcagtttaaaagaatgccttttggcttggttacagcagctgctacattttcacgtcttat gagaatagttcttcatgatatggaaaatattgagaatttcattgacgacattttgatctataccccatcatttgacatgc atatagaagttttagaacgcctttttctgcgtttacgcgaagtgaatttgacggtgagaccaagcaaatgttcagttgca tatgacaaggttgaatgtctaggtcacatggtgggtgctgacaatctaagtccaaatccagacaaagttgatgcgattgt aaatgcttctcgtccagagacaaagaaacagttacgttcatttttgggcctggtaggattttaccgaaagtttgtaccaa acttttcctctatagcgttacctttaactgacttaaccaagaaaggtgcttcaaacaaacttatttggcaagatatccat gaatcagcttttcaaactttgagacaagctttgttgaaatatccaatcctaaagttgccggatctgacggaaatgttcta tcttcaaactgatgcttccaatcgcggactaggtgctgttttgtgtcaagaagttgaaggtaagaaacttccagttgctt atgcgagtcggaaactcaaagatcatgaattgccttacgcaactgtagaaaaagagtgtctagccattgtgtgggctata caaaagttttccaggtatcttctaggttgtgaattcattttggaaactgaccataagccgttgacatttttgcatagttc caagatttcgaactctagacttatgagatgggcacttagtcttcaaccttaccgtttcagaatcattgctataaagggca aagagaatgtcggtgccgattatcttagtagaatttga |
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| Transcript ID | pfu_aug1.0_11033.1_03012.t2 |
| Definition | - |
>pfu_aug1.0_11033.1_03012.t2 atggaagaggtaagtcgcttgatttctttaaaacaactaacaacaactccttaccacccatgttgtaacggattggtaga acgatttaatggtaccttgaaacaaattttgaaacgcatgtgtgtagaacgtccaaaagattgggacagatatttaagtg cagcattgttcgcatacagggaagtaccacaagagagtctaggattttctccttttgagctcctctatggaaggtctgtc agaggtcctatgtccattcttaaagagctttggacaaaagaagtcaatgatccggaagtgaaatcgacatatgaatatgt tgttgaccttcgagaaagacttgaatctacatgtcaacttgcaaaacaaaatcttgaaaaagcatctaaaaggtataaaa ctttgtacaataggaaggcaaaaggccgaaatatgaaggtaggtgagaaagttttggtcctcctccctacagacaacaac aaactgttgatgcagtggaaaggaccgttctcaattgtagccaaggttaacaatgttgattaccgcatcgatgtcaacgg taagataaaaacgtttcatgctaacatgttaaaacattacctagagcgggtgggtatgttagtagacagttctgaatcag ttcctacaatgaacgccgtgatgattgattgtaccactgatgaacaaggtgagttacacgatcttccttatgtcaaacca aaagaaggtcctacagatgtagatatgaattcaaagttgaatgacgatcaaaagttgaaagtcatgaatctccttgaaca attttcagatatattgacagatctacctggtcagactaatttgataagtcatgacatacgactgacaagtgatcaccctg ttaagatgaagtcgagacctattccattcggaatgaatgacattgtgaacgaagaagttcagaacatgctacttctcaag gtcattgaaccatcaaccagtgcgtactgttctccaattgttttggtgaagaaaaaagatggtagcatacgattttgtat cgattttcgagcactgaacaaccaaacttacttcgatgcagaaccaatgcccgattcagaagaaatttattccaaacttg caacacataaatggttttcaaaacttgatttgtcgaaaggttactggcaggttcctcttgaagagtcatcaaaaccactt acagcctttcaaacacctaaaggtctttttcagtttaaaagaatgccttttggcttggttacagcagctgctacattttc acgtcttatgagaatagttcttcatgatatggaaaatattgagaatttcattgacgacattttgatctataccccatcat ttgacatgcatatagaagttttagaacgcctttttctgcgtttacgcgaagtgaatttgacggtgagaccaagcaaatgt tcagttgcatatgacaaggttgaatgtctaggtcacatggtgggtgctgacaatctaagtccaaatccagacaaagttga tgcgattgtaaatgcttctcgtccagagacaaagaaacagttacgttcatttttgggcctggtaggattttaccgaaagt ttgtaccaaacttttcctctatagcgttacctttaactgacttaaccaagaaaggtgcttcaaacaaacttatttggcaa gatatccatgaatcagcttttcaaactttgagacaagctttgttgaaatatccaatcctaaagttgccggatctgacgga aatgttctatcttcaaactgatgcttccaatcgcggactaggtgctgttttgtgtcaagaagttgaaggtaagaaacttc cagttgcttatgcgagtcggaaactcaaagatcatgaattgccttacgcaactgtagaaaaagagtgtctagccattgtg tgggctatacaaaagttttccaggtatcttctaggttgtgaattcattttggaaactgaccataagccgttgacattttt gcatagttccaagatttcgaactctagacttatgagatgggcacttagtcttcaaccttaccgtttcagaatcattgcta taaagggcaaagagaatgtcggtgccgattatcttagtagaatttga |
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Protein
| Protein ID | pfu_aug1.0_11033.1_03012.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11033.1_03012.t1 MSILKELWTKEVNDPEVKSTYEYVVDLRERLESTCQLAKQNLEKASKRYKTLYNRKAKGRNMKVGEKVLVLLPTDNNKLL MQWKGPFSIVAKVNNVDYRIDVNGKIKTFHANMLKHYLERVGMLVDSSESVPTMNAVMIDCTTDEQGELHDLPYVKPKEG PTDVDMNSKLNDDQKLKVMNLLEQFSDILTDLPGQTNLISHDIRLTSDHPVKMKSRPIPFGMNDIVNEEVQNMLLLKVIE PSTSAYCSPIVLVKKKDGSIRFCIDFRALNNQTYFDAEPMPDSEEIYSKLATHKWFSKLDLSKGYWQVPLEESSKPLTAF QTPKGLFQFKRMPFGLVTAAATFSRLMRIVLHDMENIENFIDDILIYTPSFDMHIEVLERLFLRLREVNLTVRPSKCSVA YDKVECLGHMVGADNLSPNPDKVDAIVNASRPETKKQLRSFLGLVGFYRKFVPNFSSIALPLTDLTKKGASNKLIWQDIH ESAFQTLRQALLKYPILKLPDLTEMFYLQTDASNRGLGAVLCQEVEGKKLPVAYASRKLKDHELPYATVEKECLAIVWAI QKFSRYLLGCEFILETDHKPLTFLHSSKISNSRLMRWALSLQPYRFRIIAIKGKENVGADYLSRI |
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| Protein ID | pfu_aug1.0_11033.1_03012.t2 |
| Definition | - |
>pfu_aug1.0_11033.1_03012.t2 MEEVSRLISLKQLTTTPYHPCCNGLVERFNGTLKQILKRMCVERPKDWDRYLSAALFAYREVPQESLGFSPFELLYGRSV RGPMSILKELWTKEVNDPEVKSTYEYVVDLRERLESTCQLAKQNLEKASKRYKTLYNRKAKGRNMKVGEKVLVLLPTDNN KLLMQWKGPFSIVAKVNNVDYRIDVNGKIKTFHANMLKHYLERVGMLVDSSESVPTMNAVMIDCTTDEQGELHDLPYVKP KEGPTDVDMNSKLNDDQKLKVMNLLEQFSDILTDLPGQTNLISHDIRLTSDHPVKMKSRPIPFGMNDIVNEEVQNMLLLK VIEPSTSAYCSPIVLVKKKDGSIRFCIDFRALNNQTYFDAEPMPDSEEIYSKLATHKWFSKLDLSKGYWQVPLEESSKPL TAFQTPKGLFQFKRMPFGLVTAAATFSRLMRIVLHDMENIENFIDDILIYTPSFDMHIEVLERLFLRLREVNLTVRPSKC SVAYDKVECLGHMVGADNLSPNPDKVDAIVNASRPETKKQLRSFLGLVGFYRKFVPNFSSIALPLTDLTKKGASNKLIWQ DIHESAFQTLRQALLKYPILKLPDLTEMFYLQTDASNRGLGAVLCQEVEGKKLPVAYASRKLKDHELPYATVEKECLAIV WAIQKFSRYLLGCEFILETDHKPLTFLHSSKISNSRLMRWALSLQPYRFRIIAIKGKENVGADYLSRI |
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