Gene
| Gene Model ID | pfu_aug1.0_110426.1_28191 |
|---|---|
| Locus | scaffold110426.1 : 327 ... 1303 : + |
| To GenomeBrowser | scaffold110426.1:327..1303 |
| Genes list of scaffold | scaffold110426.1 |
| Synonym | pfu_aug2.0_27.1_23277 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_110426.1_28191.t1 | 1 | 1 | Branch | 135 | 298 | 1.2e-27 | 96.7 | 1.2e-31 | 1.8e-27 | 96.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_110426.1_28191.t1 | gi|47226413|emb|CAG08429.1| | unnamed protein product, partial [Tetraodon nigroviridis] | 7.00649e-45 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_110426.1_28191.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_110426.1_28191.t1 atgagaatagtcagaaatgttaaggatgtagttgattttttcaccgtaggaatcctagtggtcagtatctacatgctaat gctcttcctaaatcagaacatagtgatatcagacctagagaaggtatgggaccgggagaaaacaaccgtcacagactcta tacatagatacacgacagtcagatcgcccatcagcggtcccagacgtatggtccattctgtgtcttgtgcacgcatcata gaaggtgacaaattagagatacaaaaggccaaaatcatcactcacaactctaacagtatctcagatttggaatatgtgaa tttaactcgaaattgcgcggatttcaaaatgttacaagggtttgaaaatcgtctatacaacaacttggagaaaacattcc ccatagctttcacaatactgatgtacgaaactgtggaacaaacggtgagattaatccgttctatttatagccctttcaat gtttattgtattcacgttgacgatagttccgctcctttcgtcaaacaaggaatgacgtcattcgcaaagtgctttaacaa cgttttcatggtttctaagccaatcaacgtcatctataatcatttttcaagacttcaggcagagtttaactgtatggccg atgttatgaagagaaatcgacattggaagtacctaattaatctcccgaacacagaattcccattaaaaacaaacctagaa atcataaaaatactcagtatatacaacggctcaaatgacatagagggaattacagtgccaaaccaaatgatgggtcacag aatatcacattcttacgtcttaaaaaatggacatgtggtaaaaacaaatcgtacgaagtccaagccacctcataagatcc aaatagtaaagggaagtgc |
|
Protein
| Protein ID | pfu_aug1.0_110426.1_28191.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_110426.1_28191.t1 MRIVRNVKDVVDFFTVGILVVSIYMLMLFLNQNIVISDLEKVWDREKTTVTDSIHRYTTVRSPISGPRRMVHSVSCARII EGDKLEIQKAKIITHNSNSISDLEYVNLTRNCADFKMLQGFENRLYNNLEKTFPIAFTILMYETVEQTVRLIRSIYSPFN VYCIHVDDSSAPFVKQGMTSFAKCFNNVFMVSKPINVIYNHFSRLQAEFNCMADVMKRNRHWKYLINLPNTEFPLKTNLE IIKILSIYNGSNDIEGITVPNQMMGHRISHSYVLKNGHVVKTNRTKSKPPHKIQIVKGS |
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