Gene
| Gene Model ID | pfu_aug1.0_11046.1_17711 |
|---|---|
| Locus | scaffold11046.1 : 1 ... 875 : + |
| To GenomeBrowser | scaffold11046.1:1..875 |
| Genes list of scaffold | scaffold11046.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11046.1_17711.t1 | 1 | 1 | PIG-U | 3 | 169 | 9.8e-13 | 47.7 | 3.6e-16 | 1.1e-12 | 47.5 |
| pfu_aug1.0_11046.1_17711.t1 | 1 | 1 | DUF2029 | 10 | 166 | 3.0e-09 | 36.7 | 1.3e-12 | 4.0e-09 | 36.3 |
| pfu_aug1.0_11046.1_17711.t1 | 1 | 1 | Mannosyl_trans | 76 | 171 | 4.0e-18 | 66.0 | 1.8e-21 | 5.4e-18 | 65.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11046.1_17711.t1 | gi|348545360|ref|XP_003460148.1| | PREDICTED: GPI mannosyltransferase 1-like isoform X1 [Oreochromis niloticus] | 2.0e-36 |
Transcript
| Transcript ID | pfu_aug1.0_11046.1_17711.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11046.1_17711.t1 aatgagtcaccttacctcagacccacatatcgttatactccaatcatagcctggatgctgcagccaaacatcaccttaaa ccccgccttcggcaagcttctatttatagtctttgacattatatctggataccttacctacgccatgctgataagacaag gtaccacaaaaagccgagccttgcttagtgcatctttctggctcctgaatcctttacctatcggtgtgtcgggacgaggg aatgcagagtccttcttgtctttgttagttctactcacgttcaaattccacattgagagaaagccaattttatcagcgat tttgtatggtctagcggtgcatatcaaaatttacccagtgatctatgctctaccattatatctcaatattgactcaaaga ctgacaatggacgaaaatctcttagagacagacttctacctacagttaacagagtgagatatttcatcgtagctgcagca gttttcatagccctgacatcttattactattatttgtaa |
|
Protein
| Protein ID | pfu_aug1.0_11046.1_17711.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11046.1_17711.t1 NESPYLRPTYRYTPIIAWMLQPNITLNPAFGKLLFIVFDIISGYLTYAMLIRQGTTKSRALLSASFWLLNPLPIGVSGRG NAESFLSLLVLLTFKFHIERKPILSAILYGLAVHIKIYPVIYALPLYLNIDSKTDNGRKSLRDRLLPTVNRVRYFIVAAA VFIALTSYYYYL |
|