Gene
| Gene Model ID | pfu_aug1.0_11088.1_03019 |
|---|---|
| Locus | scaffold11088.1 : 1 ... 8039 : + |
| To GenomeBrowser | scaffold11088.1:1..8039 |
| Genes list of scaffold | scaffold11088.1 |
| Synonym | pfu_aug2.0_531.1_04303 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11088.1_03019.t1 | 1 | 1 | Hydrolase_like2 | 10 | 83 | 6.6e-18 | 64.4 | 6.2e-21 | 1.3e-17 | 63.4 |
| pfu_aug1.0_11088.1_03019.t1 | 1 | 1 | HAD | 133 | 285 | 2.4e-06 | 27.8 | 1.8e-09 | 3.8e-06 | 27.2 |
| pfu_aug1.0_11088.1_03019.t1 | 1 | 1 | Hydrolase | 145 | 288 | 1.0e-15 | 58.7 | 7.1e-19 | 1.5e-15 | 58.2 |
| pfu_aug1.0_11088.1_03019.t1 | 2 | 1 | Hydrolase_3 | 167 | 203 | 2.7e-06 | 27.1 | 0.34 | 730.0 | -0.5 |
| pfu_aug1.0_11088.1_03019.t1 | 2 | 2 | Hydrolase_3 | 251 | 320 | 2.7e-06 | 27.1 | 1.0e-08 | 2.1e-05 | 24.2 |
| pfu_aug1.0_11088.1_03019.t1 | 1 | 1 | Cation_ATPase_C | 359 | 538 | 5.10073e-43 | 146.7 | 0.0 | 5.10073e-43 | 146.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11088.1_03019.t1 | gi|119351137|gb|ABL63470.1| | plasma membrane calcium ATPase [Pinctada fucata] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| 8-16cell | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_11088.1_03019.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11088.1_03019.t1 catgatccagatggaggtctacccaagcagataggtaataagacagagtgtgccctgctcggcttcgtaatggatctcaa acaggattacgaggctatccgacacgagacccccgaggaagccctgtttaaggtctacacctttaattctgtacggaagt ccatgagcacagttatcgaaatcaaaaacggctacagactcttcacgaaaggagcttcagagattgtcctgaaaaagtgt tcatacatcctggactgtcatggtaacccaaacaagttttctgtagaagatcaggagtcaatggtatccaaggtgatcga gcccatggcaagtgacggtctcaggactatctgtgtggcgtacaaggattttgttaatggtacccctgaatctgagaacc aggagcagtttaagggtgacatagactgggaagatgaggatttggtcgtttctggtctgacgtgtctcatggtggttggt atagaggatcctgtcagagacgaggtaccagccagtattatgaagtgtaaacattcaggtatctgtgtgcgtatggtgac aggtgacaatgttaacactgcacgttctatcgcctctaaatgtggaatcctgacacctggtgaagactttctggttttag acggcaaagaattcaatcgtaggatcagagacggtagcggagaggtatctcaggaactgtttgacaaggtctggcccaag cttcgcgttctggcacgatcatcacctcaggataagtacactttggttaaaggcatcatcgacagtaagctgagttcaaa ccgagaagtggtggctgtaacaggagatggtacaaatgatggaccggcactgaagaaagctgatgttggatttgcaatgg gtatatcaggaactgatgtagctaaggaagcctctgacattattctgactgacgacaattttaccagtattgtgaaggcc gtaatgtggggtagaaacgtctacgacagtatcgccaaatttctccagtttcagttgactgtaaacattgtggctgtgtt agcagctttcctcggagcatgcatcatcagtgacagtcctctgaaggccatacagatgttgtgggttaacctgatcatgg acacgctcgcttcactagccctcgccaccgagctgccaggagaagaattactgaaccgtaaaccctacggcaggaccaag ccacttatatcgcgcaacatgatgaaaaatatcctcggccatgccgtataccagctcactgttatatttgttgttctatt tgcagggtctagtttatttgatatagacgatggaatagaaaaacagaaattacatggccctgctacacaacactttacca ttatatttaatgttttcgtaatgatgactctgtttaatgaagttaattcacgtaaaatccatgggcagcgaaatgttttt gaaggtctgaggagaaatcctgtgttcattggaatttggatcggtacattcgtagctcagattattcttgttcaatttgg gggcatagccttcaagacagcaccactttcaatagatcaatggatgtggtgctttttcttgggtgtgggtgttctactct ggggacagctactcacatgtattccaactcataaattacccaagaagattttctcgtggggtcgacaccacaaggatgaa ctggaccatgtggacagccctgacctacatctggatgatgacgtgggtcgccgcggccagattctgtggctccgcggctt gacgcggctccagacacaggttttaggtattaagaatcatattatgattatggccctcttttcagaactcacattttctt accttatgagaaagatgttcgaatgtattttctttctgaatttagacttaaatgcctaa |
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Protein
| Protein ID | pfu_aug1.0_11088.1_03019.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11088.1_03019.t1 HDPDGGLPKQIGNKTECALLGFVMDLKQDYEAIRHETPEEALFKVYTFNSVRKSMSTVIEIKNGYRLFTKGASEIVLKKC SYILDCHGNPNKFSVEDQESMVSKVIEPMASDGLRTICVAYKDFVNGTPESENQEQFKGDIDWEDEDLVVSGLTCLMVVG IEDPVRDEVPASIMKCKHSGICVRMVTGDNVNTARSIASKCGILTPGEDFLVLDGKEFNRRIRDGSGEVSQELFDKVWPK LRVLARSSPQDKYTLVKGIIDSKLSSNREVVAVTGDGTNDGPALKKADVGFAMGISGTDVAKEASDIILTDDNFTSIVKA VMWGRNVYDSIAKFLQFQLTVNIVAVLAAFLGACIISDSPLKAIQMLWVNLIMDTLASLALATELPGEELLNRKPYGRTK PLISRNMMKNILGHAVYQLTVIFVVLFAGSSLFDIDDGIEKQKLHGPATQHFTIIFNVFVMMTLFNEVNSRKIHGQRNVF EGLRRNPVFIGIWIGTFVAQIILVQFGGIAFKTAPLSIDQWMWCFFLGVGVLLWGQLLTCIPTHKLPKKIFSWGRHHKDE LDHVDSPDLHLDDDVGRRGQILWLRGLTRLQTQVLGIKNHIMIMALFSELTFSYLMRKMFECIFFLNLDLNA |
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