Gene
| Gene Model ID | pfu_aug1.0_1111.1_15349 |
|---|---|
| Locus | scaffold1111.1 : 796 ... 26365 : + |
| To GenomeBrowser | scaffold1111.1:796..26365 |
| Genes list of scaffold | scaffold1111.1 |
| Synonym | pfu_aug2.0_149.1_30289 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1111.1_15349.t1 | 7 | 1 | fn3 | 126 | 151 | 6.1e-36 | 122.4 | 0.0029 | 8.5 | 6.5 |
| pfu_aug1.0_1111.1_15349.t1 | 7 | 2 | fn3 | 177 | 232 | 6.1e-36 | 122.4 | 0.063 | 190.0 | 2.2 |
| pfu_aug1.0_1111.1_15349.t1 | 7 | 3 | fn3 | 287 | 327 | 6.1e-36 | 122.4 | 2.7e-06 | 0.0081 | 16.2 |
| pfu_aug1.0_1111.1_15349.t1 | 7 | 4 | fn3 | 368 | 410 | 6.1e-36 | 122.4 | 6.9e-06 | 0.02 | 14.9 |
| pfu_aug1.0_1111.1_15349.t1 | 7 | 5 | fn3 | 424 | 524 | 6.1e-36 | 122.4 | 2.7e-09 | 7.9e-06 | 25.9 |
| pfu_aug1.0_1111.1_15349.t1 | 7 | 6 | fn3 | 538 | 611 | 6.1e-36 | 122.4 | 1.0e-12 | 3.1e-09 | 36.8 |
| pfu_aug1.0_1111.1_15349.t1 | 7 | 7 | fn3 | 639 | 712 | 6.1e-36 | 122.4 | 1.3e-07 | 0.00039 | 20.4 |
Transcript
| Transcript ID | pfu_aug1.0_1111.1_15349.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1111.1_15349.t1 atggcccttgaacatagaaattttgattggttcttttccaaacttcatacacttaaagcttatgacaagaagatgaacaa ggtcataggtcaaagtacaaaatcgataattcagaaaatcataaacgaaggcatacgaaatcaggataaaacaagaacca aagcaaacaaagaaaatcctccaccatatgaaaagaagcaaactcccaaaatggaagtgagaccaggtccttcagatcct aactgttcagttgttatttatgatgcaaaaaatgattccattttcgtcaatttaactggatacgtttcggtcggggcaaa atcatacgatctaatacttaaacgagggaacgccattttgcataatataacatcaacgatggatgtccaactcacaaact tggaaataggggaaagttatattctaaccgtggctgctgttggacctggaggtttaagaagcagcaacagttgtcaaaaa actgtatacacaagaccgatggggccatcttgtaatgtcacactggacgttaatgaaacatctgttgatattgaattcaa tgatgattttccaaaaggcgcttccggctacatactcagcgtagatccaatttcattaaactttcataaaacaaatttgg atgcacatgttatcttcgttccgggacttacgtcaggaaaccactacaatcttagttggaagagctacggaactgacaat ttaacaagtacagaacgatgtttttcagagttttttgcaagcacatgctacacaatatatatagctgctgctactgaatc tggatatggagaaacaactacgtcaaatatatatacagttgaggaagctcctggacccatcaataactttgacacagcaa atgcttcttcaaaatctttacgagtgcgttgggagattccaaaggagccaaatggagtaattatatcatatttgatcaaa atatttcgcaatgacagcaacagatgtattaagtcagtattactacagtgtaatagatgtttgaaatcttgtccaacttc aacttctggtggaaatgtacacgaaagaaagacagtagaatttaggaatataacgtgtgtaaataatgaaactaaaaact ttacaggcaggaaaacttctttcgatgaaatagtcgatggattaaatccatatagcatgtatcatattgatgtgtacgct tttacgaagaagggacaagggaatataagcacaagaacacaaagaacaagtcaagatgtaccaagtaatgtcagaaacat cgctatcaatacaagtgtgaaatatgcggatattgtgttcaatcatccaaaagatccaaacggtattattacaagatatg aaatcgaatgcattccagacaacactacaaaggactgttacaagtcaaacggtgcatttgaagaaatcattaagctcaaa acagtgaacatcacagaaagggaaaaacttgatgaaatccctgtttcgtgtcgcattgaaaatctttatccattttggaa ttataagattcgagtaagaggttttacatatgctggtcatggaaattggagcatgtctatgccaatacgtacgaagccat ccaaaccaggtccaattgaaaacattaaggtaacagacgtcacaagcagcagcgtatcactggtatgggatccaccttgc tttacaaatggaatcatcatgcgatatcatattatgacaacaccgtatggcaacaattctaaatctacgagtggaaacga aacaatgatcaaaataaacaaccttctgccttttcaaaactatacttttaaaacaaaagctgaaacaattggtggaggaa ataatacaggaattgattcacctgtcatacaaactctctgtgcaaagccatatccagcagcagatctcaaagaagtaacg aaaacttcaaattcagtaacattaatatggcagaagccggacctacgaacttgtctcacaaattatacggtaacggcaac agatacgaagaactctagtttaaaacaatcttgttcgacagcagggtttgatcataccaactgtaccattacaagtttgg acgagttctgggaatatcacattgttttgcggtcaaaaaccgtaaatggtagcacagaagctagtaaaaagatagtcatt agaacgaatgaagcagatatcataaagcttgatcgtagcagctttttagatgtgttgcaaaactcggctcttcatttttg taaaacggacaagctatcgtcaacaacttgtttccggactagaattcatatatga |
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Protein
| Protein ID | pfu_aug1.0_1111.1_15349.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1111.1_15349.t1 MALEHRNFDWFFSKLHTLKAYDKKMNKVIGQSTKSIIQKIINEGIRNQDKTRTKANKENPPPYEKKQTPKMEVRPGPSDP NCSVVIYDAKNDSIFVNLTGYVSVGAKSYDLILKRGNAILHNITSTMDVQLTNLEIGESYILTVAAVGPGGLRSSNSCQK TVYTRPMGPSCNVTLDVNETSVDIEFNDDFPKGASGYILSVDPISLNFHKTNLDAHVIFVPGLTSGNHYNLSWKSYGTDN LTSTERCFSEFFASTCYTIYIAAATESGYGETTTSNIYTVEEAPGPINNFDTANASSKSLRVRWEIPKEPNGVIISYLIK IFRNDSNRCIKSVLLQCNRCLKSCPTSTSGGNVHERKTVEFRNITCVNNETKNFTGRKTSFDEIVDGLNPYSMYHIDVYA FTKKGQGNISTRTQRTSQDVPSNVRNIAINTSVKYADIVFNHPKDPNGIITRYEIECIPDNTTKDCYKSNGAFEEIIKLK TVNITEREKLDEIPVSCRIENLYPFWNYKIRVRGFTYAGHGNWSMSMPIRTKPSKPGPIENIKVTDVTSSSVSLVWDPPC FTNGIIMRYHIMTTPYGNNSKSTSGNETMIKINNLLPFQNYTFKTKAETIGGGNNTGIDSPVIQTLCAKPYPAADLKEVT KTSNSVTLIWQKPDLRTCLTNYTVTATDTKNSSLKQSCSTAGFDHTNCTITSLDEFWEYHIVLRSKTVNGSTEASKKIVI RTNEADIIKLDRSSFLDVLQNSALHFCKTDKLSSTTCFRTRIHI |
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