Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_11113.1_39150
Locus scaffold11113.1 : 30106 ... 43051 : +
To GenomeBrowser scaffold11113.1:30106..43051
Genes list of scaffold scaffold11113.1
Synonym pfu_aug2.0_601.1_04388

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_11113.1_39150.t1 gi|260793551|ref|XP_002591775.1| hypothetical protein BRAFLDRAFT_83549 [Branchiostoma floridae] 0.0

Transcript
Transcript IDpfu_aug1.0_11113.1_39150.t1
Definition-
>pfu_aug1.0_11113.1_39150.t1
atgagtgtgaaattactgaaagcaagatttaaacagagcgtactcttcttacgtaagaaagccgatcaaaagtttgttat
tatactggactcagtagatcagcttgatgcttccaatgatggccgacaggtgttgtcatggatactgaaaacactgccag
aaaacgtcaagataatcatctctacgttagagaacaaggaatatgaagcatttcctctactcaaggcagaactttcagag
cagtcctttgtcaatgtaccagatttcagcttggacggagctattgaaatcattgaccattggtcaaaggacaggaaaag
acagcttacccaactacagaagtcaaagttaatagatgcattcaaaagcttctccttgccattgtttctgaaactatctg
ctgagaaggcttttcaatggaggtcttttaggccagagaacaacgtcctttttgaaacaaatataaaagaggccatacat
gcattgtttggtcggattgagaagaggcatggcaggacattggttagccatgccttagggtacataacaacagccaaact
tggtatgtcggaggcagaacttgaggacgtactttcatgtgacgatgaggtgttgaacaatgtgtaccagtactggacac
cccctgtacgaagatcagtgttagaggatttccaattagcccgtgcagcatttcctgcagatcaacaaataagtactctg
ggtgatactttgtacctgtcatggaaggctctacagtttgatgccagacaattcacagcacaatttattgacagactctc
ccatgataagaatttagccagttttgtggaagattgccgtgctcatccagtgccatatctgaaagccacaaaagatttcc
tcatccgtcctggtggaccgctgacctacagtctgcctggacatagtggagcatttttgaatggtctggacctttgtaag
agagaagatgggactttgatagcagctacaggtggaaatgatggatgccttagaatttggaatgcgagtgagggccatct
gctgaaatcctgcggcagatttggtgacgaggtcagtctcattaggtttgctgccaacaactccagaattgttgtggact
atgagaagcatgttgtagtctttgaccttgacggaaacaaactttatacattgacttcacaaggccaggtgtttcgagag
gtcagtggggaaggcagagacaaattagtgtgttttggagaaaaagagacgttaatttactcagtggcagatggtagcct
tctcgacacattacagagccctgccaaggctaagctaggcataccagcaatgacaggaagttcagtaaactatatagcca
tgacaggagacatacaagagagattcggttacctacacttaccaacaaaaacattctcaaaattcttgaaaccaaagaat
gatgtcactggatttgcatttttgaaagaggaaaaggaactaattgtgtgccatgacaacccctttgaattntttgactt
ctacgaaacaagctctctcacaaaaatgagatcttttcaagttggatcaggcatacaggggtcatttggtccaagtcctg
tccacatttcctctgacgagaaattcctgtacttcaccgaagacatatatgtgtccattgtagacctccagcaagagaag
caaattcggcagttcaagcaccctctttcttcatcagagtgtctgacgttagatgaaaagacgtgggtgacaacttcgga
ggactgcctagtcagggtgtggaattctgagatatccatagatactgaacctcagtcagaacagcagaaaaagaaaaata
cctccagtttacggtaa

Protein
Protein IDpfu_aug1.0_11113.1_39150.t1
Definition-
>pfu_aug1.0_11113.1_39150.t1
MSVKLLKARFKQSVLFLRKKADQKFVIILDSVDQLDASNDGRQVLSWILKTLPENVKIIISTLENKEYEAFPLLKAELSE
QSFVNVPDFSLDGAIEIIDHWSKDRKRQLTQLQKSKLIDAFKSFSLPLFLKLSAEKAFQWRSFRPENNVLFETNIKEAIH
ALFGRIEKRHGRTLVSHALGYITTAKLGMSEAELEDVLSCDDEVLNNVYQYWTPPVRRSVLEDFQLARAAFPADQQISTL
GDTLYLSWKALQFDARQFTAQFIDRLSHDKNLASFVEDCRAHPVPYLKATKDFLIRPGGPLTYSLPGHSGAFLNGLDLCK
REDGTLIAATGGNDGCLRIWNASEGHLLKSCGRFGDEVSLIRFAANNSRIVVDYEKHVVVFDLDGNKLYTLTSQGQVFRE
VSGEGRDKLVCFGEKETLIYSVADGSLLDTLQSPAKAKLGIPAMTGSSVNYIAMTGDIQERFGYLHLPTKTFSKFLKPKN
DVTGFAFLKEEKELIVCHDNPFEXFDFYETSSLTKMRSFQVGSGIQGSFGPSPVHISSDEKFLYFTEDIYVSIVDLQQEK
QIRQFKHPLSSSECLTLDEKTWVTTSEDCLVRVWNSEISIDTEPQSEQQKKKNTSSLR

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495