Gene
| Gene Model ID | pfu_aug1.0_11141.1_46328 |
|---|---|
| Locus | scaffold11141.1 : 23908 ... 39276 : - |
| To GenomeBrowser | scaffold11141.1:23908..39276 |
| Genes list of scaffold | scaffold11141.1 |
| Synonym | pfu_aug2.0_2287.1_25372 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11141.1_46328.t1 | 1 | 1 | adh_short | 3 | 144 | 3.1e-11 | 43.4 | 1.3e-14 | 3.9e-11 | 43.1 |
| pfu_aug1.0_11141.1_46328.t1 | 1 | 1 | adh_short_C2 | 4 | 163 | 1.5e-06 | 28.2 | 8.5e-10 | 2.5e-06 | 27.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11141.1_46328.t1 | gi|170039978|ref|XP_001847792.1| | short-chain dehydrogenase [Culex quinquefasciatus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| 8-16cell | 1 |
| trochophore | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_11141.1_46328.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11141.1_46328.t1 gaacttcaaaatctggctaagacaaattcaaatctacatatcttaaaactcgatgtagggaacatgactgatatagaaag gatcaaggaggagttggagtccgtattaatagacaggggacttaacttgctgatcaacaactctggtataaactatagaa tgtctctggacaacgtcactgcagacaaactaaacacactattccagaccaatgtcacgggacccattatggtcacaaag acatttttacctcttctgaagaaggcagcgtcacagcacgaggacaagtcgttgagtacaagtcgtgccgccgtcattaa catatcatctatactagggtccatagaagaaaacacatcaggtggtttacatggatatcgtccatcgaaggcggcattga acatgttcacgaagagcctgagtgtagagttacgtgaacacggaatcctagctgcggctttacatcctggctgggtacgt acagatatgggtggtccgagagccacgctcggagaggaggaaagcatccgaggatgtctgaatgttatagccggactgac agaagaaaagagcgggaaaatgatcgcctttgacgggcgggttataccatggtga |
|
Protein
| Protein ID | pfu_aug1.0_11141.1_46328.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11141.1_46328.t1 ELQNLAKTNSNLHILKLDVGNMTDIERIKEELESVLIDRGLNLLINNSGINYRMSLDNVTADKLNTLFQTNVTGPIMVTK TFLPLLKKAASQHEDKSLSTSRAAVINISSILGSIEENTSGGLHGYRPSKAALNMFTKSLSVELREHGILAAALHPGWVR TDMGGPRATLGEEESIRGCLNVIAGLTEEKSGKMIAFDGRVIPW |
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