Gene
| Gene Model ID | pfu_aug1.0_1115.1_65808 |
|---|---|
| Locus | scaffold1115.1 : 27316 ... 31212 : + |
| To GenomeBrowser | scaffold1115.1:27316..31212 |
| Genes list of scaffold | scaffold1115.1 |
| Synonym | pfu_aug2.0_1670.1_01761 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1115.1_65808.t1 | 1 | 1 | Fibrinogen_C | 40 | 169 | 3.0e-33 | 115.3 | 2.6e-37 | 3.9e-33 | 115.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1115.1_65808.t1 | gi|317453195|emb|CBM41043.1| | fibrinogen-related protein 4 [Mytilus galloprovincialis] | 6.0e-25 |
Transcript
| Transcript ID | pfu_aug1.0_1115.1_65808.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1115.1_65808.t1 atgctcaatttggtaatctattatattcgtatatttgatggaaatattctaagtggtcattatatactttataccattgt agtaaatgctgaagttgcaaaagagcgtcataaccgaaacgaatgcctccatcaacttacaagagatagaaattgtcttc taaaaattgacatggtgaactgggatgacttagcccgctttgctgaatacacagattttcgaattgacaacgagacagag ggataccgattacatattgaaaattactccggtgacgcaaatgattctctctccttacataatggacataaatttagcac gttggatgtggacaatgatacttatcgttcagaaaattgtgcagtgagattcacgggtgcatggtggtatgccaactgtc ataactcaaacttaaacggcgattatagtcagcgaaatagtaaaggcgtcaaatggaggcaatatcctggatcggattat atgaaagaaactgtaatgaaactaaaatgtacataa |
|
Protein
| Protein ID | pfu_aug1.0_1115.1_65808.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1115.1_65808.t1 MLNLVIYYIRIFDGNILSGHYILYTIVVNAEVAKERHNRNECLHQLTRDRNCLLKIDMVNWDDLARFAEYTDFRIDNETE GYRLHIENYSGDANDSLSLHNGHKFSTLDVDNDTYRSENCAVRFTGAWWYANCHNSNLNGDYSQRNSKGVKWRQYPGSDY MKETVMKLKCT |
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