Gene
| Gene Model ID | pfu_aug1.0_11227.1_17741 |
|---|---|
| Locus | scaffold11227.1 : 8307 ... 29799 : + |
| To GenomeBrowser | scaffold11227.1:8307..29799 |
| Genes list of scaffold | scaffold11227.1 |
| Synonym | pfu_aug2.0_2655.1_18885 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11227.1_17741.t1 | 3 | 1 | Mob_synth_C | 49 | 75 | 1.4e-22 | 79.7 | 0.79 | 3900.0 | -2.6 |
| pfu_aug1.0_11227.1_17741.t1 | 2 | 1 | Radical_SAM | 96 | 185 | 1.2e-13 | 51.5 | 2.4e-17 | 1.2e-13 | 51.5 |
| pfu_aug1.0_11227.1_17741.t1 | 3 | 2 | Mob_synth_C | 188 | 274 | 1.4e-22 | 79.7 | 1.6e-25 | 7.7e-22 | 77.3 |
| pfu_aug1.0_11227.1_17741.t1 | 2 | 2 | Radical_SAM | 253 | 292 | 1.2e-13 | 51.5 | 0.63 | 3100.0 | -1.9 |
| pfu_aug1.0_11227.1_17741.t1 | 3 | 3 | Mob_synth_C | 354 | 394 | 1.4e-22 | 79.7 | 0.16 | 790.0 | -0.3 |
| pfu_aug1.0_11227.1_17741.t1 | 1 | 1 | MoaC | 398 | 533 | 0.0 | 172.2 | 0.0 | 0.0 | 171.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11227.1_17741.t1 | gi|332823996|ref|XP_001173932.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_11227.1_17741.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11227.1_17741.t1 atgcttgaaaaggaccattgtgttacgaatggactatcacaggatgcaccgaaccatctggactccatgacaacaagctc atctcgagatgctggtcatccttccatccaatctcacacagcaaaatttcacatggcagagaaagatgttaatttgatgg acctttctacagaacagaaaatttcggaggttttaacagacacgtttaaacggaagcacgattatctacgtatttccctc agcgagaagtgtaatttaagataaaacctagacagacttcgccccgatggtcttcagtctatcgcaatgacaaccaatgg tgtgaccttgtggagaaggttaccggctctgaaggcagctggccttgaccttttgaacatcagcctggatacgttgatac ctgccaagtttgagtttattacgaggaggaaaggctgggaccgagtcataaagagtatagacacagctctggatctggga tacaaccctgtgaaggtaaactgtgttgtaatgaggggagttaatgaagaggaaatcctggactttgttaattttaccaa agacaaggcctacaaagttccaggttacaaagggcagattgggttcatcacgtccatgagcgagcatttctgtggatcgt gtaatagattacgtataacggcagatggtaaccttaagggaaatacaaattctattttccaggtgtgtttgtttggtaat tctgaggtgtcgttacgggacaagctgagggaagggttgtcacaagaagatctcctacaggttgtagaggctgccgttaa aaggaaacacaaacagcatgcaggtgatagactaatcaaacgcaataaggctgtggagagaagtagactgtgctcaaaac tacctcataatcagatcttatcgtactcgtttattaatataactccacgtatttgccatcgtagatggtgctgctcattt acccagcattccacagatagtgaggtagaattaggcaaacccggtgctgattttaacgaattaccaatgaattttaacgt tgatttgacaactaatattgtgaataagcatatctgtgatactgcaataaaatgttccgaaatcaaggatgaaatcgaaa aatctgttgatagatcgaatgaagaggatgacgaaaggttgacacataccgataaacatgggaaagccaatatggtggat gtcggagggaagcctccgagtgtgagagtagccatagcttgtgccacaatctccttaggtcccatagcgtacaatttagt acgggaaaataaaaccaagaaaggggacgttttgtcggtagcacagctggctggaataatggccgcaaaggaaacgagtc gtctcattccgttatgtcatcctataccactgacaaaaataacggtagattgtaaacttgttccgagctcacacagtgta tatattgagtgtgaggccaggacgtacggacagacaggcgtggagatggaagcaattacgggggcgtctattgcggctgt taccgtttacgacatgtgtaaggcagtcacacatgacatggttataaaagacgtcaagttgctgaggaaaactggtggtg tgagaggggactattcaaggagttaa |
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Protein
| Protein ID | pfu_aug1.0_11227.1_17741.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11227.1_17741.t1 MLEKDHCVTNGLSQDAPNHLDSMTTSSSRDAGHPSIQSHTAKFHMAEKDVNLMDLSTEQKISEVLTDTFKRKHDYLRISL SEKCNLRXNLDRLRPDGLQSIAMTTNGVTLWRRLPALKAAGLDLLNISLDTLIPAKFEFITRRKGWDRVIKSIDTALDLG YNPVKVNCVVMRGVNEEEILDFVNFTKDKAYKVPGYKGQIGFITSMSEHFCGSCNRLRITADGNLKGNTNSIFQVCLFGN SEVSLRDKLREGLSQEDLLQVVEAAVKRKHKQHAGDRLIKRNKAVERSRLCSKLPHNQILSYSFINITPRICHRRWCCSF TQHSTDSEVELGKPGADFNELPMNFNVDLTTNIVNKHICDTAIKCSEIKDEIEKSVDRSNEEDDERLTHTDKHGKANMVD VGGKPPSVRVAIACATISLGPIAYNLVRENKTKKGDVLSVAQLAGIMAAKETSRLIPLCHPIPLTKITVDCKLVPSSHSV YIECEARTYGQTGVEMEAITGASIAAVTVYDMCKAVTHDMVIKDVKLLRKTGGVRGDYSRS |
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