Gene
| Gene Model ID | pfu_aug1.0_1123.1_29567 |
|---|---|
| Locus | scaffold1123.1 : 4062 ... 29265 : - |
| To GenomeBrowser | scaffold1123.1:4062..29265 |
| Genes list of scaffold | scaffold1123.1 |
| Synonym | pfu_aug2.0_807.1_24429 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1123.1_29567.t1 | 2 | 1 | MAM | 43 | 135 | 7.7e-25 | 87.5 | 1.1e-12 | 3.4e-09 | 36.6 |
| pfu_aug1.0_1123.1_29567.t1 | 2 | 2 | MAM | 206 | 333 | 7.7e-25 | 87.5 | 2.0e-16 | 5.8e-13 | 48.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1123.1_29567.t1 | gi|195998914|ref|XP_002109325.1| | hypothetical protein TRIADDRAFT_53234 [Trichoplax adhaerens] | 3.0e-13 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1123.1_29567.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1123.1_29567.t1 atgttggattcatcttttggtgatgcggattctgcctaccctgaagtttgtcatgaaggagagaactgtaaggtgattgc cctgtctagtatcagacgaagaaatatgaaaggctgtcttgtatctgacttcttaccagatggtgccaaatgtgtaacgt tagcctactacatgcacggcgatggatcggggagtttaaacgtctacggtcttgccgatgaaggagacttatacatcctt agagtgacagaggacctaggagatcagtggcaaacaataagtctagacgttcctcctagaacaaacgaaaggatattcgt tcgtgtaaaaagaacttcaagacgaaacagaaataccatgattgtagctgttgatgagatggaggttttggaaggaacat gtccatgcagtagaattccttgtgcgaatggcggtacatgcaatgctaatggtaactgtcaatgcgtcgatggatatacg ggatctcgctgcgagcaagaaggttgcggcattaatccatgtgtgaatgggggaacatgtggcgcagacttcatatgtga ttgtgtaaccggatttgcagggaatcaatgtgaactaatagattctgctgtaacatgtggctttgaggcggacttctgcg agctgatacagacaaatgacgatgatgcaaactggctaagactaagcgatacaaccccttcttacttcaccggtccatct gaagctgctgagggcagcacctacgcatacattgaagcctcggaaatgtctgttggcgacattgctacactggaaacatc agatgagtttgcaagtggagatagatgtatcagattacagttgcacatgcgaggctattggggtcacatgggtctcttca aaatttttgctggcaatgatggagcttgggagttggcctatgtagatgcaggtcatcaaggatcagaatggtataacgta gaggtcacgtggaacttggaaaggaaaaagatatggatatgtcgactgaaatccaaaacccaaaatgccgaaagcgagaa agtatggaaataa |
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Protein
| Protein ID | pfu_aug1.0_1123.1_29567.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1123.1_29567.t1 MLDSSFGDADSAYPEVCHEGENCKVIALSSIRRRNMKGCLVSDFLPDGAKCVTLAYYMHGDGSGSLNVYGLADEGDLYIL RVTEDLGDQWQTISLDVPPRTNERIFVRVKRTSRRNRNTMIVAVDEMEVLEGTCPCSRIPCANGGTCNANGNCQCVDGYT GSRCEQEGCGINPCVNGGTCGADFICDCVTGFAGNQCELIDSAVTCGFEADFCELIQTNDDDANWLRLSDTTPSYFTGPS EAAEGSTYAYIEASEMSVGDIATLETSDEFASGDRCIRLQLHMRGYWGHMGLFKIFAGNDGAWELAYVDAGHQGSEWYNV EVTWNLERKKIWICRLKSKTQNAESEKVWK |
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