Gene
| Gene Model ID | pfu_aug1.0_1124.1_65817 |
|---|---|
| Locus | scaffold1124.1 : 30258 ... 42459 : - |
| To GenomeBrowser | scaffold1124.1:30258..42459 |
| Genes list of scaffold | scaffold1124.1 |
| Synonym | pfu_aug2.0_1553.1_11730 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1124.1_65817.t1 | 1 | 1 | Tektin | 38 | 420 | 0.0 | 503.8 | 0.0 | 0.0 | 503.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1124.1_65817.t1 | gi|194068377|dbj|BAG55009.1| | tektin [Saccostrea kegaki] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| egg-Dshape | 4 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 2 |
| maleGonad | 1 |
| mantle | 2 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1124.1_65817.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1124.1_65817.t1 tactccatcgaagaaaggaggcaaacacagaaaaacaatccatcttcaagagttcctcaattttaaggatggctaagtta gtaactggtcccactagatttacccatccagaatggacaacgtcaaatctaacacattacgctaatgctgagtcagagcg tgctgctgccgagagactggtagaagaatccaaacgactcagtgatgaaacggaaaaacgaacagagaaaactcaaaggg atgttaacaaaaaatttgagcaaagaataactgatatcaagtattggaaaaaagaattagacgacaagctcaatgaacta gctacagaaatcgacagtctcactgccttcaaagcacgtgttgagaaagctcttgaggctacagctgaacctctacatat tgcacgaggttgcttagcaaacagagagaagaggcaagcgatagatttagtacacgatgatgtacagaaggagctaatta aggaagtagagacgattgagggtgtacaggccttactaaggaggacactggaacaagcctcggaacaaatcagattaaat cgcaaggcaaagtaccagttggagaaagacttgaaggacaaatttggagcgttgagtattgatgaatactgtgcaaatct gaggaacaattcagcaggattaaacatgaaagatggtgtagctaaaattgaggctaactctgtgtctccagaagattggc aggatttctctgatgctaacatccttaaggcggagcgtgagcgtcagagctccgtagagcttcgttctctgattgacggg atcctccagcaaacctccaacgacatgaggaagcaatgtaacgaggtcaatgtagcgttcaacaagagaatatccgaaac gaaagacacaaagagcaaactcgaggaccatctcaacaggattgttaagcaaatcaaagaaatcgaggagaacatctccc gtctgcagaaatcaatcgccgataaggaactgcctatgaaactatctcagacacgtctagacaccagacagagccggcca aatgtagagttatgtcgcgatcctgttcaataccggctgatcgaggaagtacacgaaatagagtcgtcggttgaacaact gcaagcacgacttgctcaaacacaggattcgcttaaaggactcattcgtaatcagttgtctttggaggaggatatcggaa ttaaggcgaacaccctgttcatcgatgaagtagaatgcatgggcatgagaaaaagcataaatatccaaaatttctag |
|
Protein
| Protein ID | pfu_aug1.0_1124.1_65817.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1124.1_65817.t1 LHRRKEANTEKQSIFKSSSILRMAKLVTGPTRFTHPEWTTSNLTHYANAESERAAAERLVEESKRLSDETEKRTEKTQRD VNKKFEQRITDIKYWKKELDDKLNELATEIDSLTAFKARVEKALEATAEPLHIARGCLANREKRQAIDLVHDDVQKELIK EVETIEGVQALLRRTLEQASEQIRLNRKAKYQLEKDLKDKFGALSIDEYCANLRNNSAGLNMKDGVAKIEANSVSPEDWQ DFSDANILKAERERQSSVELRSLIDGILQQTSNDMRKQCNEVNVAFNKRISETKDTKSKLEDHLNRIVKQIKEIEENISR LQKSIADKELPMKLSQTRLDTRQSRPNVELCRDPVQYRLIEEVHEIESSVEQLQARLAQTQDSLKGLIRNQLSLEEDIGI KANTLFIDEVECMGMRKSINIQNF |
|