Gene
| Gene Model ID | pfu_aug1.0_11276.1_24864 |
|---|---|
| Locus | scaffold11276.1 : 14266 ... 28473 : - |
| To GenomeBrowser | scaffold11276.1:14266..28473 |
| Genes list of scaffold | scaffold11276.1 |
| Synonym | pfu_aug2.0_471.1_04220 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11276.1_24864.t1 | 4 | 1 | CH | 48 | 158 | 0.0 | 253.0 | 3.9e-25 | 1.5e-21 | 76.4 |
| pfu_aug1.0_11276.1_24864.t1 | 4 | 1 | CAMSAP_CH | 72 | 141 | 3.5e-10 | 39.3 | 1.6e-09 | 6.0e-06 | 25.8 |
| pfu_aug1.0_11276.1_24864.t1 | 4 | 2 | CH | 191 | 293 | 0.0 | 253.0 | 4.3e-21 | 1.6e-17 | 63.5 |
| pfu_aug1.0_11276.1_24864.t1 | 4 | 2 | CAMSAP_CH | 209 | 228 | 3.5e-10 | 39.3 | 0.48 | 1800.0 | -1.4 |
| pfu_aug1.0_11276.1_24864.t1 | 4 | 3 | CH | 313 | 417 | 0.0 | 253.0 | 4.2e-20 | 1.6e-16 | 60.3 |
| pfu_aug1.0_11276.1_24864.t1 | 4 | 3 | CAMSAP_CH | 324 | 361 | 3.5e-10 | 39.3 | 0.0054 | 20.0 | 4.9 |
| pfu_aug1.0_11276.1_24864.t1 | 4 | 4 | CH | 436 | 535 | 0.0 | 253.0 | 1.6e-16 | 5.8e-13 | 48.8 |
| pfu_aug1.0_11276.1_24864.t1 | 4 | 4 | CAMSAP_CH | 460 | 521 | 3.5e-10 | 39.3 | 0.012 | 45.0 | 3.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_11276.1_24864.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11276.1_24864.t1 atttattctgacctccaaaacaaagaggtagccaggacttttaagaaagcagtgacagcacgtaagggtgttgaagtcca tggaggtacgagcgaggcgtcagtagagggcaccacacacactgtccgtgatgaggaaagcaagtccttcactgaatgga taaacaagactttggaagctgatgatgactgcaaggcatatctgccaatgagacctgatagcaatgatttgtatgagaaa ataaaagatggtattgtgctttgcaagttgatcaacaagtcagtaccagatactattgacgagaggacaataaacaaaac caagctgagtgtgtaccgtcagacagaaaaccacaatttggctctgaattccgctcaatctattggatgtaacattgtaa atataggaccagatgatctgatgaaaggcaagccccatcttgtgttaggtcttgtctggcaagttatcaggattggactg ttaagtgatattaatattgccatgcatcctggtctggtggctctcctacaaggcgatgaaaccatagaagacctcaagag gctttctccagaggaaatccttatcagatgggttaactatcatttggaaaggtcaggaactgatagaagaattaaaaact tcacatcagatattcaggactctgaagcatacagctatcttttagagcagatagcaccaagggaaagtggtgttaattca ggcgtaccattaagtgagtcagatttaactcagcgtgcagagaagatgttacaggaagcagagaagattgattgtcgtgc ctttgtatcacctggagatgttgtcaaaggaaactataagctcaacatggcttttgtcgctaaccttttcaatacttatc cagctttggatgctaacacagaaatattagaagacattgtggaagagaccagagaagaaaaaacttatcgtaattggatg aacagtatgggagttcaaccatatgtccactatttgtattctgatctcaatgatggattggtgattttcaaactttatga tataatacagccaggctgcgtagactggaggagggtccatacaagattcaacaaaatgaaggaaaattttgaaaaacttg agaactgtaattactgtgtagagcttggaaagcagcagaaattttcattggttggtgtaggaggacaagatattagggat tctaatccaactcttacgctagctcttgtatggcagctaatgagggcgtacaccttaagcattctgaagaagctgtctga tgaggatagacaaatcacagatgctgatattattaactgggcaaacgcaaagctgaaggagtgtggaaagaaaagcagct ttacaagttttcaagacaagacattgagtgatggacgaactgtgattgatttgattgacagtgtaaaagtaggatgtatc aactatgatatagtcaaagatgcctcatctgaagaagataggttatcgaatgccaagtatgccatttcaatggccaggaa agctggagccaaagtgtacgcactccctgaggacatagtagatgtaaagcccaagatgatgatgaccatatttgcctgtc ttatgatcaaagatttgggatcgcagcaaaagcagaacggagaatag |
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Protein
| Protein ID | pfu_aug1.0_11276.1_24864.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11276.1_24864.t1 IYSDLQNKEVARTFKKAVTARKGVEVHGGTSEASVEGTTHTVRDEESKSFTEWINKTLEADDDCKAYLPMRPDSNDLYEK IKDGIVLCKLINKSVPDTIDERTINKTKLSVYRQTENHNLALNSAQSIGCNIVNIGPDDLMKGKPHLVLGLVWQVIRIGL LSDINIAMHPGLVALLQGDETIEDLKRLSPEEILIRWVNYHLERSGTDRRIKNFTSDIQDSEAYSYLLEQIAPRESGVNS GVPLSESDLTQRAEKMLQEAEKIDCRAFVSPGDVVKGNYKLNMAFVANLFNTYPALDANTEILEDIVEETREEKTYRNWM NSMGVQPYVHYLYSDLNDGLVIFKLYDIIQPGCVDWRRVHTRFNKMKENFEKLENCNYCVELGKQQKFSLVGVGGQDIRD SNPTLTLALVWQLMRAYTLSILKKLSDEDRQITDADIINWANAKLKECGKKSSFTSFQDKTLSDGRTVIDLIDSVKVGCI NYDIVKDASSEEDRLSNAKYAISMARKAGAKVYALPEDIVDVKPKMMMTIFACLMIKDLGSQQKQNGE |
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