Gene
| Gene Model ID | pfu_aug1.0_11285.1_24866 |
|---|---|
| Locus | scaffold11285.1 : 14266 ... 28351 : + |
| To GenomeBrowser | scaffold11285.1:14266..28351 |
| Genes list of scaffold | scaffold11285.1 |
| Synonym | pfu_aug2.0_12933.1_13141 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11285.1_24866.t1 | 1 | 1 | NUDIX | 59 | 190 | 9.8e-26 | 89.9 | 8.8e-30 | 1.3e-25 | 89.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11285.1_24866.t1 | gi|320170746|gb|EFW47645.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_11285.1_24866.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11285.1_24866.t1 atggccaccagaacagcttcctcagaatcagatgaattcctgtcagggctagatcccatacagaaaaggttattggagga aaactgcatccttattgacgaaaatgataggagagttggccatgcaacaaagaaggattgtcatctcaactctaacattg aaacaggactgttgcacagagctttcagtgttttcctgtttaatatagatggtaaactactccttcagcaaagatctacg gctaaaattacatttccaggttatttcaccaatacatgctgtagtcacccattaaatacagaattggaattagaggaagc cggtgcattaggtgttaaaagagctgctcaaagaaaactggagcacgagctcggcatatcaccaaatcaggtatcattag aggacattcactacttaactcgggtgtggtacaaggcgagatctgatggtacctggggagagcatgaaatagactactgc ctcatagctcagaaagacgtaaatgttgacgcaaacaaaaacgaggtgatggattggagatatgtggacagagaggagct taagaacttgatcattgtctctatggatcatcgcacaagagggatgtttaagtccattgaatcatttgcttctgacaacg ttgtttacaacgtcactccgatctcgtaa |
|
Protein
| Protein ID | pfu_aug1.0_11285.1_24866.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11285.1_24866.t1 MATRTASSESDEFLSGLDPIQKRLLEENCILIDENDRRVGHATKKDCHLNSNIETGLLHRAFSVFLFNIDGKLLLQQRST AKITFPGYFTNTCCSHPLNTELELEEAGALGVKRAAQRKLEHELGISPNQVSLEDIHYLTRVWYKARSDGTWGEHEIDYC LIAQKDVNVDANKNEVMDWRYVDREELKNLIIVSMDHRTRGMFKSIESFASDNVVYNVTPIS |
|