Gene
| Gene Model ID | pfu_aug1.0_11307.1_24870 |
|---|---|
| Locus | scaffold11307.1 : 27131 ... 30805 : - |
| To GenomeBrowser | scaffold11307.1:27131..30805 |
| Genes list of scaffold | scaffold11307.1 |
| Synonym | pfu_aug2.0_551.1_04329 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11307.1_24870.t1 | 1 | 1 | PI-PLC-X | 39 | 176 | 5.9e-12 | 45.1 | 1.1e-15 | 8.4e-12 | 44.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11307.1_24870.t1 | gi|291240158|ref|XP_002739990.1| | PREDICTED: uncharacterized protein LOC100378594 [Saccoglossus kowalevskii] | 1.4013e-45 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_11307.1_24870.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11307.1_24870.t1 atgggaaactcaataacaaagggacctggattttggaactctacggaaacacccgataccaagtacgacaactgggtgtc tttgttattagatgacagatctatcgctgatctttcaatacccggaacacatcaatcagtggccaatgcagggctagtgt ggtcttggtgtcaaagtctgtcactagaagcacaactgagtcttggcgtcagatttttcgatattcacctgcgccatgtc gacaacaacctaccggtgtaccacgcgaaggtttaccaaaattccaatcttgcagacgttctcaaacccatcatcgagtt tttgaacgtccacactttcgaagtggtggtgatgaggataaaggaagaggtcatgaccaagcaggatgatgattatgaaa cgacctacaacagagatgtattttgtaaagccgtcaacgatgagatccaaagatttccgaaagagaggttctggttcaac ggtgatattccttcgctaggtgatgccagaggaaaaatagtcctcatttctgacttttatacggactacccgttgggtat accctccagtaatttgaaggtttcagatgaatggaatgtggaattgggcgagaaaaaatgggaaattgtcagaaaacaca ttaaagaggtgatcgcaggttcccggaatgaactctgtataacatttacaagcgctaaaggaggattggcgtcaccagga gagatagctaatgttgtgaacgccaaacttcatagctttgtttgtggaaagcaggaaagatttgggattatagccatgga ttatcctgggccacagctcattagggacatcattgatagcaacttctga |
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Protein
| Protein ID | pfu_aug1.0_11307.1_24870.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11307.1_24870.t1 MGNSITKGPGFWNSTETPDTKYDNWVSLLLDDRSIADLSIPGTHQSVANAGLVWSWCQSLSLEAQLSLGVRFFDIHLRHV DNNLPVYHAKVYQNSNLADVLKPIIEFLNVHTFEVVVMRIKEEVMTKQDDDYETTYNRDVFCKAVNDEIQRFPKERFWFN GDIPSLGDARGKIVLISDFYTDYPLGIPSSNLKVSDEWNVELGEKKWEIVRKHIKEVIAGSRNELCITFTSAKGGLASPG EIANVVNAKLHSFVCGKQERFGIIAMDYPGPQLIRDIIDSNF |
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