Gene
| Gene Model ID | pfu_aug1.0_11332.1_46364 |
|---|---|
| Locus | scaffold11332.1 : 4876 ... 21900 : + |
| To GenomeBrowser | scaffold11332.1:4876..21900 |
| Genes list of scaffold | scaffold11332.1 |
| Synonym | pfu_aug2.0_996.1_21333 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11332.1_46364.t1 | 3 | 1 | Nic96 | 27 | 74 | 0.0 | 274.7 | 0.069 | 510.0 | -1.6 |
| pfu_aug1.0_11332.1_46364.t1 | 3 | 2 | Nic96 | 178 | 241 | 0.0 | 274.7 | 1.0e-07 | 0.00076 | 17.7 |
| pfu_aug1.0_11332.1_46364.t1 | 3 | 3 | Nic96 | 242 | 471 | 0.0 | 274.7 | 0.0 | 0.0 | 260.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11332.1_46364.t1 | gi|327287838|ref|XP_003228635.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_11332.1_46364.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11332.1_46364.t1 atgtcttttttcaccgcggaaattgctcccacaaaacacgtaccgacgttacagatggatacagacggggaagactttgc cgatctattacagcaggctgatcaactcgcggcagacgccgagacaggatcggacctaccacgtgttacacgtaatctca atcagatatatgagaccagtcaacgtcttgtctcaaaagttgctccaatcagtcaagattccacagatgttaaagcttca atattgctgggtacaaaaggctacgatgttccaaagatctcacagaaactagagggactgagtgctgccaagacttttga acctttagaacctgtccgggatactgatatacagagttttctaagaaatgaaagagaaaatgccttgcttgctgttattg agcagacaaagagaaatagctttgtagcggagcctgtgagcatgcatggtcgtagtaaccttgacaacatggaaatggcc tatgctagacaggtttttgtttacaatgaacgcattgtcgagggcagcatccgaccaaacttggtggatatgttccacga cgtagcaagacaaagtgatgataagcatgtatgtgagctatgggaaatggtgaagtccatgacagaggtccccctagtgg ccactgatagtataaaggaaacacgtctagatccccgtactcaggcatcgtttattgtacaggccaaacagtatctggaa caaatgttaagtgctgggagtgagaagaagttaagtttacagtacagacggagtgtcaaaggtggaacggatccttttaa aaaggtgtgttactgtgtgataggtgggtgtgacccagacgaggatcaccctgaggtagcagacagtatagacgattact tgtggattaagttatctcagatacagctccacccagagtccacacaccaagacccgttcacactacacaaactacaaaaa cttctctttgaagattttggtgagagtcatttcagtggctaccagcagccgttcctgtattttgaagtgctcatccttac ggcacaatttgaggcagctatagaattcctatcccgtatcgacagactcatgtgtcatgcggtgcacgtagcgctggcat tctacgaacagaaactgttgttacttccccagaacagtcaagctcagctcttaacaaaagagccaagtgacataagtccg ttacggagattgaactttgtacgtctcatcacgatgtacacacggaagtttgaggctacggatgccagggaagccttaca atacttctacttcctcagggacttgcacacatcacaaggtgaaaatctcttcaagtcatgtgtcagtgaattagtgctag agaccagagagtttgagatgctcttgggtaaaatagacagagatggtacaagacatatacaggacccagggtaa |
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Protein
| Protein ID | pfu_aug1.0_11332.1_46364.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11332.1_46364.t1 MSFFTAEIAPTKHVPTLQMDTDGEDFADLLQQADQLAADAETGSDLPRVTRNLNQIYETSQRLVSKVAPISQDSTDVKAS ILLGTKGYDVPKISQKLEGLSAAKTFEPLEPVRDTDIQSFLRNERENALLAVIEQTKRNSFVAEPVSMHGRSNLDNMEMA YARQVFVYNERIVEGSIRPNLVDMFHDVARQSDDKHVCELWEMVKSMTEVPLVATDSIKETRLDPRTQASFIVQAKQYLE QMLSAGSEKKLSLQYRRSVKGGTDPFKKVCYCVIGGCDPDEDHPEVADSIDDYLWIKLSQIQLHPESTHQDPFTLHKLQK LLFEDFGESHFSGYQQPFLYFEVLILTAQFEAAIEFLSRIDRLMCHAVHVALAFYEQKLLLLPQNSQAQLLTKEPSDISP LRRLNFVRLITMYTRKFEATDAREALQYFYFLRDLHTSQGENLFKSCVSELVLETREFEMLLGKIDRDGTRHIQDPG |
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