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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_113383.1_13704
Locus scaffold113383.1 : 1 ... 1175 : -
To GenomeBrowser scaffold113383.1:1..1175
Genes list of scaffold scaffold113383.1
Synonym pfu_aug2.0_2074.1_15384

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_113383.1_13704.t1 1 1 Neur_chan_LBD 19 76 1.6e-09 37.2 3.6e-13 2.7e-09 36.5
pfu_aug1.0_113383.1_13704.t1 1 1 Neur_chan_memb 126 203 1.0e-09 38.6 1.4e-13 1.0e-09 38.6

Transcript
Transcript IDpfu_aug1.0_113383.1_13704.t1
Definition-
>pfu_aug1.0_113383.1_13704.t1
atgaccctctatatatctttatcggaaaggaacaaacttattggaaacgatgttacaaaagaaaatgtggagatcagtca
ttcaggggacgtctatgttgttgtaaacggagtattcgatatattatgtgaaccagacataaaaatgtttccattcgaca
gacacacttgtcctttagaaatacctgcaaatagaccacacaccgaagttagtctgaatacaaacagtgcagttttggat
gaagtccttcaaaagaattcaagatggttcttcgaaagttcgacctatcaaattaacgagactgtaggaagataccacat
tctacgatataatattacatttcaccgatattccttcttcttgtctttgaatctagtagttccagtttgcattctgacaa
tcgtaaacccgctggttttccttctgccattaaattcaggtgaaaaagtttcgttttctataaccatcttgttgtccttt
gtagtatttgtgtcatcagtgtcagacaagctgccggaagtgagcgagcccgtttgcatgttcaacacctttattattgc
tcaacttgtttacagttctctcattactttcactgtaattgtactgtcaagatcagagggagacacagacatacacctta
aatttatggactgcaattgttgtggcgacaaaactcgggtgggttggataaaagacgaaaacgaaatatccgaaaagatg
cagattgctccaacaagaagtgacactatgaagaagtgtagcctgggatcttgtaccattgcatgtttcgttggttttat
gctctttgctgtcgtggaaataattgtcatggttggattggtggtgtaa

Protein
Protein IDpfu_aug1.0_113383.1_13704.t1
Definition-
>pfu_aug1.0_113383.1_13704.t1
MTLYISLSERNKLIGNDVTKENVEISHSGDVYVVVNGVFDILCEPDIKMFPFDRHTCPLEIPANRPHTEVSLNTNSAVLD
EVLQKNSRWFFESSTYQINETVGRYHILRYNITFHRYSFFLSLNLVVPVCILTIVNPLVFLLPLNSGEKVSFSITILLSF
VVFVSSVSDKLPEVSEPVCMFNTFIIAQLVYSSLITFTVIVLSRSEGDTDIHLKFMDCNCCGDKTRVGWIKDENEISEKM
QIAPTRSDTMKKCSLGSCTIACFVGFMLFAVVEIIVMVGLVV

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