Gene
| Gene Model ID | pfu_aug1.0_11346.1_68321 |
|---|---|
| Locus | scaffold11346.1 : 25636 ... 40285 : + |
| To GenomeBrowser | scaffold11346.1:25636..40285 |
| Genes list of scaffold | scaffold11346.1 |
| Synonym | pfu_aug2.0_2284.1_15473 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11346.1_68321.t1 | 3 | 1 | Ank_2 | 135 | 210 | 3.4e-10 | 40.1 | 4.0e-05 | 0.098 | 13.0 |
| pfu_aug1.0_11346.1_68321.t1 | 2 | 1 | Ank | 164 | 181 | 4.6e-07 | 29.3 | 0.0032 | 7.9 | 6.4 |
| pfu_aug1.0_11346.1_68321.t1 | 3 | 2 | Ank_2 | 243 | 318 | 3.4e-10 | 40.1 | 2.4e-08 | 6.0e-05 | 23.2 |
| pfu_aug1.0_11346.1_68321.t1 | 2 | 2 | Ank | 262 | 289 | 4.6e-07 | 29.3 | 5.4e-07 | 0.0013 | 18.3 |
| pfu_aug1.0_11346.1_68321.t1 | 3 | 3 | Ank_2 | 297 | 329 | 3.4e-10 | 40.1 | 0.49 | 1200.0 | -0.1 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_11346.1_68321.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11346.1_68321.t1 atgacgcattttgatcggaccaaagtagaagaactgctcacagctttatggcagagcaaagacaaagacatccagagctt catcgcaaggaacgatgattcccgtcattattacgtaggttactgtgagtatgttaattccggtcattatgacgtagata gctgtgcgaacgttaattctcgtcattattacgtagattactactattactgtgagtatgttaattcccgtcatcatgac gtagatagctgtgcgaacgttaattctcgtcattattacgtagattactactgttgtacccacaatgaggttttatgtta ctgtgcccaggaactagaggtcctaccactagatgtgcatgatacagaacagttcagacgtatctgcatcaatttctatg tcggtaatgtcgaaatgtgcgagaaaatactgaaaagatactcaaaatattacaacaaagaatctaggcaacatgttgac gtttatactctggcagtattgcagaattacccagaagttttgaaagttttattgagttacagtgtaccaccttttcaaca tgggaatttcacagcactagactttgccagaagtttccaacgtgaaaaatgcagtgatattttacgtcgagttaaccatg attgtctggagtttacaacggacatctctcctttactggaggtgcagaagctagatcatatgacgtgcaagctaacactc tcttttgtgaaactggtggaagagctggtacacataggattcaatgttaactttgaagatccaaatggaataacagctgt tcaaatggcgataaagcgtcaagactatgacactgtgagagtgttgttacagaacggagctgatttattccgtggacaga gcttcatgctacagcacggtaccctaagactcgttacggaggttatccattgtaacgtggatgtttgtgatcatttatct acgattttagagattgcctctaggtacatcagatatcccagacatcgtgttgagattacagtacggactgacagtgagaa ggtgatatattccttcatatcaaactctcttcacagtttaagtccacgtgataggagagatatagtaaagtattacaagg aatatgacctcctgtgtgtacggtcattgcaggagttatccagaataaagctcaggcgacattatggatggcatattcac aaatttgttgatttggtaacaatacctaaatcattaaaacgttttatattgcttgcagatgctatcgaagcatttaaaaa agatatcatactgtaa |
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Protein
| Protein ID | pfu_aug1.0_11346.1_68321.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11346.1_68321.t1 MTHFDRTKVEELLTALWQSKDKDIQSFIARNDDSRHYYVGYCEYVNSGHYDVDSCANVNSRHYYVDYYYYCEYVNSRHHD VDSCANVNSRHYYVDYYCCTHNEVLCYCAQELEVLPLDVHDTEQFRRICINFYVGNVEMCEKILKRYSKYYNKESRQHVD VYTLAVLQNYPEVLKVLLSYSVPPFQHGNFTALDFARSFQREKCSDILRRVNHDCLEFTTDISPLLEVQKLDHMTCKLTL SFVKLVEELVHIGFNVNFEDPNGITAVQMAIKRQDYDTVRVLLQNGADLFRGQSFMLQHGTLRLVTEVIHCNVDVCDHLS TILEIASRYIRYPRHRVEITVRTDSEKVIYSFISNSLHSLSPRDRRDIVKYYKEYDLLCVRSLQELSRIKLRRHYGWHIH KFVDLVTIPKSLKRFILLADAIEAFKKDIIL |
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