Gene
| Gene Model ID | pfu_aug1.0_1135.1_51209 |
|---|---|
| Locus | scaffold1135.1 : 57908 ... 70545 : - |
| To GenomeBrowser | scaffold1135.1:57908..70545 |
| Genes list of scaffold | scaffold1135.1 |
| Synonym | pfu_aug2.0_2909.1_32338 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1135.1_51209.t1 | 2 | 1 | Ig_3 | 50 | 127 | 3.7e-12 | 46.5 | 2.0e-09 | 4.3e-06 | 27.1 |
| pfu_aug1.0_1135.1_51209.t1 | 2 | 1 | I-set | 51 | 140 | 1.1e-16 | 60.4 | 5.3e-14 | 1.1e-10 | 41.1 |
| pfu_aug1.0_1135.1_51209.t1 | 2 | 1 | Ig_2 | 51 | 129 | 2.1e-11 | 43.7 | 1.9e-07 | 0.00039 | 20.4 |
| pfu_aug1.0_1135.1_51209.t1 | 2 | 1 | ig | 66 | 118 | 5.5e-07 | 29.6 | 8.8e-08 | 0.00019 | 21.5 |
| pfu_aug1.0_1135.1_51209.t1 | 2 | 2 | I-set | 154 | 203 | 1.1e-16 | 60.4 | 1.2e-06 | 0.0025 | 17.6 |
| pfu_aug1.0_1135.1_51209.t1 | 2 | 2 | Ig_3 | 154 | 200 | 3.7e-12 | 46.5 | 2.1e-06 | 0.0045 | 17.4 |
| pfu_aug1.0_1135.1_51209.t1 | 2 | 2 | Ig_2 | 160 | 196 | 2.1e-11 | 43.7 | 9.6e-08 | 0.0002 | 21.3 |
| pfu_aug1.0_1135.1_51209.t1 | 2 | 2 | ig | 170 | 188 | 5.5e-07 | 29.6 | 0.0061 | 13.0 | 6.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1135.1_51209.t1 | gi|213623946|gb|AAI70434.1| | XPTP-D protein [Xenopus laevis] | 5.0e-16 |
Transcript
| Transcript ID | pfu_aug1.0_1135.1_51209.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1135.1_51209.t1 atgcgactctgctacggattgctacgactcagctacggattgctacgactctgcgacggatttctacgactctgctacgg attgctccgactctcctacggaatgttacgattcacctacgggttgctccggataaccaaggattttccaccagttatca cgctacctttaaggaaccagatcgtcctcaaagatagtaaagtaagtttggtttgtaaagcagcagggacagggccaata agattcacatggctgaaagaaggcaaaacgctcagtgagaataggatgcgcttcactgttcgttccattccaaacggaag tgtgctcagaattgatcctgtaaaatccaaggaccaggaatttgcttgtatagcaaataatgttgcgggtcaatcagttc cttctgaggcacatctaagtgttcttaccagcctgcccagagatttcataaatggatacccgagaatcgtggtgcatcct ccactaagagtcgctgagaagggtagagatgtaacattagcctgtaaagcagagggagataacgtaacaatagagtggta taaagattacgtgccattagatgtcaacaacgatgagcgcttaaacatcctacctggagttagaaacgactttgagattt ggacagatgaccttgaaatgatttaa |
|
Protein
| Protein ID | pfu_aug1.0_1135.1_51209.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1135.1_51209.t1 MRLCYGLLRLSYGLLRLCDGFLRLCYGLLRLSYGMLRFTYGLLRITKDFPPVITLPLRNQIVLKDSKVSLVCKAAGTGPI RFTWLKEGKTLSENRMRFTVRSIPNGSVLRIDPVKSKDQEFACIANNVAGQSVPSEAHLSVLTSLPRDFINGYPRIVVHP PLRVAEKGRDVTLACKAEGDNVTIEWYKDYVPLDVNNDERLNILPGVRNDFEIWTDDLEMI |
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