Gene
| Gene Model ID | pfu_aug1.0_1136.1_00628 |
|---|---|
| Locus | scaffold1136.1 : 38750 ... 43125 : - |
| To GenomeBrowser | scaffold1136.1:38750..43125 |
| Genes list of scaffold | scaffold1136.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1136.1_00628.t1 | 6 | 1 | LRR_8 | 33 | 88 | 4.5e-22 | 77.5 | 1.0e-10 | 2.2e-07 | 30.5 |
| pfu_aug1.0_1136.1_00628.t1 | 9 | 1 | LRR_1 | 33 | 47 | 8.6e-09 | 34.2 | 0.051 | 110.0 | 3.4 |
| pfu_aug1.0_1136.1_00628.t1 | 5 | 1 | LRR_4 | 54 | 87 | 1.8e-14 | 52.9 | 4.4e-07 | 0.00094 | 18.7 |
| pfu_aug1.0_1136.1_00628.t1 | 9 | 2 | LRR_1 | 54 | 75 | 8.6e-09 | 34.2 | 6.0e-05 | 0.13 | 12.4 |
| pfu_aug1.0_1136.1_00628.t1 | 9 | 3 | LRR_1 | 78 | 97 | 8.6e-09 | 34.2 | 0.0066 | 14.0 | 6.1 |
| pfu_aug1.0_1136.1_00628.t1 | 6 | 2 | LRR_8 | 137 | 194 | 4.5e-22 | 77.5 | 5.6e-05 | 0.12 | 12.1 |
| pfu_aug1.0_1136.1_00628.t1 | 5 | 2 | LRR_4 | 156 | 202 | 1.8e-14 | 52.9 | 0.0045 | 9.6 | 5.9 |
| pfu_aug1.0_1136.1_00628.t1 | 9 | 4 | LRR_1 | 187 | 197 | 8.6e-09 | 34.2 | 0.19 | 400.0 | 1.7 |
| pfu_aug1.0_1136.1_00628.t1 | 6 | 3 | LRR_8 | 307 | 335 | 4.5e-22 | 77.5 | 0.00095 | 2.0 | 8.2 |
| pfu_aug1.0_1136.1_00628.t1 | 6 | 4 | LRR_8 | 307 | 336 | 4.5e-22 | 77.5 | 0.00019 | 0.4 | 10.4 |
| pfu_aug1.0_1136.1_00628.t1 | 5 | 3 | LRR_4 | 307 | 336 | 1.8e-14 | 52.9 | 0.00012 | 0.25 | 11.0 |
| pfu_aug1.0_1136.1_00628.t1 | 9 | 5 | LRR_1 | 307 | 316 | 8.6e-09 | 34.2 | 0.43 | 900.0 | 0.6 |
| pfu_aug1.0_1136.1_00628.t1 | 9 | 6 | LRR_1 | 325 | 337 | 8.6e-09 | 34.2 | 0.012 | 26.0 | 5.3 |
| pfu_aug1.0_1136.1_00628.t1 | 6 | 5 | LRR_8 | 354 | 412 | 4.5e-22 | 77.5 | 1.1e-13 | 2.3e-10 | 40.0 |
| pfu_aug1.0_1136.1_00628.t1 | 5 | 4 | LRR_4 | 354 | 392 | 1.8e-14 | 52.9 | 4.9e-08 | 0.0001 | 21.8 |
| pfu_aug1.0_1136.1_00628.t1 | 9 | 7 | LRR_1 | 355 | 376 | 8.6e-09 | 34.2 | 0.00013 | 0.27 | 11.3 |
| pfu_aug1.0_1136.1_00628.t1 | 5 | 5 | LRR_4 | 377 | 416 | 1.8e-14 | 52.9 | 2.3e-10 | 4.9e-07 | 29.2 |
| pfu_aug1.0_1136.1_00628.t1 | 9 | 8 | LRR_1 | 378 | 397 | 8.6e-09 | 34.2 | 0.0064 | 14.0 | 6.2 |
| pfu_aug1.0_1136.1_00628.t1 | 9 | 9 | LRR_1 | 401 | 416 | 8.6e-09 | 34.2 | 0.00058 | 1.2 | 9.4 |
| pfu_aug1.0_1136.1_00628.t1 | 1 | 1 | TIR | 563 | 644 | 1.8e-16 | 59.8 | 2.3e-19 | 5.0e-16 | 58.4 |
| pfu_aug1.0_1136.1_00628.t1 | 1 | 1 | TIR_2 | 564 | 667 | 8.8e-08 | 32.2 | 8.2e-11 | 1.7e-07 | 31.2 |
| pfu_aug1.0_1136.1_00628.t1 | 6 | 6 | LRR_8 | 651 | 676 | 4.5e-22 | 77.5 | 0.12 | 260.0 | 1.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1136.1_00628.t1 | gi|260813350|ref|XP_002601381.1| | hypothetical protein BRAFLDRAFT_82677 [Branchiostoma floridae] | 2.0e-31 |
Transcript
| Transcript ID | pfu_aug1.0_1136.1_00628.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1136.1_00628.t1 atgtgtgtgtgtacacagattgacaaatacaatttcaaagcagattgctcaggaaagaatatatccgaaattcctatctt cactgaagccgttcttgaaatcgacctcagtcggaatgaaaagctgacaatcattcgtgaaaacaactctttgccaagtc aactgatacgattagatttatcgtcatgtaatttacaatctatagaactaggtgtctttcaatatttgaaaaagttaact tatcttgacatttcatggaacatggagctcacattaggggttcttccaaatattaccaatgatttgataggttcagacat caaaacgttaaaattcaatgcaatacagtgctctgttggtgcgggaataactcttcaatatgaacatttgtgtagattac acaacacatcgcttcaggcaatagaaatgtcaaagaatagaatagatatggtagaacaattcacaatccagaatttacca ccgacgctgatgaacatttcagtaggtcacaaccaattacgatttggattgtatttcttggaagcaaattctatggcaaa tcttcgatacttaaacctggatgacatgtacctgttggacaatccatttgaaaatcctctgagtgtaacgtgtaaagatt acgataaaattaaatcaaattctgttcgcactcaagctggtcttgttccatgtccaaatgaacatacggtctcaaagtca agcttacatgatagcaaattaataatgcatatgcctccaaaacttgaaacaatggttggaaataactgtatcgttcgttt cactgaaaagttaagtaacctcgtgctgaaattttattccttaagaatcgcacgtgtaaataataactttctccaatatt tatatggaactgattattctcaaaaactacaagagggctacttttcgaattgctttataaaagatattgataatctattt tttgagacgagcaatttaacaatactggatttatcacaaaacttattggggaaatacttctctacgaatacgtctgctaa acagttggcccgtcagaaatatcttaaaattcttaatttgtcatataacagacttcaccatgccccacatgatctttttc atggactcacgaggcttgaagtactaaatatcagcaataccgaggtcacgaaaattcactttaaactcgatagtttggtt agtctcaaaacccttgatttgacaaacaacagaattcaaacatttacagaatataacatgaaagtattcgatgagttgag tgagggatcttttatttccattaatttaatcgggaatgatatttcatgcacctgtgacactctaaaattcttgacatgga tgcagagtaaacaaagaaaaggtagtagaataagattcatgaatttcgaaaagtatacatgtttttcggcaaattctaga cagaaaaatttcataaatatttccgaaattattttggaattacagaaaaattgttcttctaaaactgctgtatatgtcgt aagtggctttgttctggtcctatttatcgttatcgttatagcagggatactatatcggtatcgatggaaactaaggtata tttatcacatgacacgtcgaagtctgcgaggatatttcttattacaaaaccaggacgggagtgaaataaaatgcttcgag ttcgatgcctttgtaagttatgctgaagaggatgctcactttgggcacgacaccttaaaatcgaaggtactaagtaaata tccatcagctaaattatgttatcataaggaacattttttacccggacggagcattcctgaaagcatcgtgaatgctgtaa attgtagcaggaaaaccgtctgcgttttgtctgaacattttcttgcatcagaatggtgtatctatgagttcaagatggcc aatttggagaagatatataagcgatgtgatcaaaactcacttcttgttctgaaatttggaaatgtcaatcttgatagttt accagcagacattatgatctacctgaaatccaggtcttacatggaaattccgtataatatagacgactctgacggattct gggatctcatcgttaacgcaatcatggacgaataa |
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Protein
| Protein ID | pfu_aug1.0_1136.1_00628.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1136.1_00628.t1 MCVCTQIDKYNFKADCSGKNISEIPIFTEAVLEIDLSRNEKLTIIRENNSLPSQLIRLDLSSCNLQSIELGVFQYLKKLT YLDISWNMELTLGVLPNITNDLIGSDIKTLKFNAIQCSVGAGITLQYEHLCRLHNTSLQAIEMSKNRIDMVEQFTIQNLP PTLMNISVGHNQLRFGLYFLEANSMANLRYLNLDDMYLLDNPFENPLSVTCKDYDKIKSNSVRTQAGLVPCPNEHTVSKS SLHDSKLIMHMPPKLETMVGNNCIVRFTEKLSNLVLKFYSLRIARVNNNFLQYLYGTDYSQKLQEGYFSNCFIKDIDNLF FETSNLTILDLSQNLLGKYFSTNTSAKQLARQKYLKILNLSYNRLHHAPHDLFHGLTRLEVLNISNTEVTKIHFKLDSLV SLKTLDLTNNRIQTFTEYNMKVFDELSEGSFISINLIGNDISCTCDTLKFLTWMQSKQRKGSRIRFMNFEKYTCFSANSR QKNFINISEIILELQKNCSSKTAVYVVSGFVLVLFIVIVIAGILYRYRWKLRYIYHMTRRSLRGYFLLQNQDGSEIKCFE FDAFVSYAEEDAHFGHDTLKSKVLSKYPSAKLCYHKEHFLPGRSIPESIVNAVNCSRKTVCVLSEHFLASEWCIYEFKMA NLEKIYKRCDQNSLLVLKFGNVNLDSLPADIMIYLKSRSYMEIPYNIDDSDGFWDLIVNAIMDE |
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