Gene
| Gene Model ID | pfu_aug1.0_11376.1_24886 |
|---|---|
| Locus | scaffold11376.1 : 1 ... 14266 : + |
| To GenomeBrowser | scaffold11376.1:1..14266 |
| Genes list of scaffold | scaffold11376.1 |
| Synonym | pfu_aug2.0_1190.1_01457 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11376.1_24886.t1 | 2 | 1 | Ank_2 | 6 | 88 | 1.7e-23 | 82.7 | 2.0e-15 | 6.0e-12 | 45.7 |
| pfu_aug1.0_11376.1_24886.t1 | 3 | 1 | Ank_5 | 16 | 63 | 1.4e-22 | 79.1 | 9.6e-11 | 2.9e-07 | 30.5 |
| pfu_aug1.0_11376.1_24886.t1 | 4 | 1 | Ank | 24 | 55 | 1.2e-23 | 81.6 | 1.3e-11 | 4.0e-08 | 32.6 |
| pfu_aug1.0_11376.1_24886.t1 | 4 | 1 | Ank_3 | 24 | 52 | 1.7e-15 | 55.5 | 1.1e-06 | 0.0031 | 17.5 |
| pfu_aug1.0_11376.1_24886.t1 | 3 | 1 | Ank_4 | 25 | 69 | 1.3e-17 | 63.8 | 2.4e-09 | 7.2e-06 | 26.3 |
| pfu_aug1.0_11376.1_24886.t1 | 4 | 2 | Ank | 59 | 89 | 1.2e-23 | 81.6 | 2.0e-07 | 0.0006 | 19.4 |
| pfu_aug1.0_11376.1_24886.t1 | 4 | 2 | Ank_3 | 59 | 86 | 1.7e-15 | 55.5 | 4.6e-05 | 0.14 | 12.5 |
| pfu_aug1.0_11376.1_24886.t1 | 2 | 2 | Ank_2 | 68 | 145 | 1.7e-23 | 82.7 | 1.1e-15 | 3.4e-12 | 46.5 |
| pfu_aug1.0_11376.1_24886.t1 | 3 | 2 | Ank_4 | 73 | 111 | 1.3e-17 | 63.8 | 5.7e-10 | 1.7e-06 | 28.3 |
| pfu_aug1.0_11376.1_24886.t1 | 3 | 2 | Ank_5 | 77 | 131 | 1.4e-22 | 79.1 | 2.1e-16 | 6.1e-13 | 48.5 |
| pfu_aug1.0_11376.1_24886.t1 | 4 | 3 | Ank | 92 | 113 | 1.2e-23 | 81.6 | 3.1e-07 | 0.00091 | 18.9 |
| pfu_aug1.0_11376.1_24886.t1 | 4 | 3 | Ank_3 | 92 | 113 | 1.7e-15 | 55.5 | 5.9e-05 | 0.18 | 12.1 |
| pfu_aug1.0_11376.1_24886.t1 | 3 | 3 | Ank_4 | 120 | 140 | 1.3e-17 | 63.8 | 0.0085 | 25.0 | 5.5 |
| pfu_aug1.0_11376.1_24886.t1 | 4 | 4 | Ank | 124 | 145 | 1.2e-23 | 81.6 | 0.00029 | 0.85 | 9.5 |
| pfu_aug1.0_11376.1_24886.t1 | 4 | 4 | Ank_3 | 124 | 145 | 1.7e-15 | 55.5 | 0.0015 | 4.4 | 7.8 |
| pfu_aug1.0_11376.1_24886.t1 | 3 | 3 | Ank_5 | 130 | 146 | 1.4e-22 | 79.1 | 0.46 | 1400.0 | -0.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11376.1_24886.t1 | gi|291243301|ref|XP_002741541.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_11376.1_24886.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11376.1_24886.t1 gaattgtcgtaacgacgctattgaagctttgacaaatgcaagccaagaggaaataaatgacggagacgatgatggactaa caccgctgatgaaagccgctatatcaggaaatagtggcaccgtcaaacttttacttagcaaaggtggcgatatatcagcg agggacgagaactgttgcactgccttgttgttggtgtcacgtaaaggtcttgctgacgtcatgaatatcttactggataa ttatgcagatattaatgctacagataaacaaaagaacacatcccttcatttggcctgttatggcggacatgcagcgtgtg tctccttacttctccgacgctactgtaaagccacactgaggaacgcctctggtaaaacaccgttagatctggcaatagac ggtagacacacagaggtggcagtggaactacttagtgacgaaaataggtggcaagaaataatggatgccaaagataggaa aggaaaaggaccaatggaagccctaatcgaaaaagttcctgatgcgtttctggttgtgatgaacagatgtacagtgagat cacatcataccaaggacgatgacgactacactataaagtataactttaagtacatcgaccctggtcctcccaaagacaaa ccgggatggcagatctccaaacgttactacgcactcgatacgatggttaaatttcggcgcgaagaactgttgtcacatcc gctagcccagcacttacttattttgaaatggaggaaatttggacgatttcagttctacgccaatttgtttatgtacatag tgtacttaatactccaaaccctttataccctcttcattcctaaaataaagaccaatctgttggacaatgtccggcgctgc ccagtgtacctgaccgcagaagaacaaaacaaccaaacggcaatagacattaaagttaaaggctggcgttatttcttgca tccgacctatattctgacagacattatgctaataacgacttcactgtatttgattaatatatcggtgcttccatgtgaga acgaattccgcagtgggtggatttcatcgttcgtggcttggatagtaattatgatgtacttaaggagcttaggcggcatt ggtatctattttgttatgtttgaggaagtcatgatttcattattaaaggtatctgtggttctgatactatttgtgatggc tttcagtcaagctggctccgtgactcttgcaatgagggatggtttcggagagttcgacccctcgccgttagcggtgtttg ccatgacgttaggggagctgaattatatagacacattcgtgacctcagataacagtcccttcacgacagataactatatc ctcgtcaccatcttcatgtttgttatgcctatagccttaatgaacctattgataggtgtcgctgttggagacattgaaaa aattcagaagcaagcatatcttacaaaaatcaaaattcaggtttcagacctgtgtagaacagaagaaaggtttcctttgt atttccaaagaaaactatacagacaatacgacgaaataaaaccaaacttagctcgcaagtcattcttcaaccggaatggc acatgtacagagtacactgattcagacccaggagatgatgaagtctatgtgtga |
|
Protein
| Protein ID | pfu_aug1.0_11376.1_24886.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11376.1_24886.t1 NCRNDAIEALTNASQEEINDGDDDGLTPLMKAAISGNSGTVKLLLSKGGDISARDENCCTALLLVSRKGLADVMNILLDN YADINATDKQKNTSLHLACYGGHAACVSLLLRRYCKATLRNASGKTPLDLAIDGRHTEVAVELLSDENRWQEIMDAKDRK GKGPMEALIEKVPDAFLVVMNRCTVRSHHTKDDDDYTIKYNFKYIDPGPPKDKPGWQISKRYYALDTMVKFRREELLSHP LAQHLLILKWRKFGRFQFYANLFMYIVYLILQTLYTLFIPKIKTNLLDNVRRCPVYLTAEEQNNQTAIDIKVKGWRYFLH PTYILTDIMLITTSLYLINISVLPCENEFRSGWISSFVAWIVIMMYLRSLGGIGIYFVMFEEVMISLLKVSVVLILFVMA FSQAGSVTLAMRDGFGEFDPSPLAVFAMTLGELNYIDTFVTSDNSPFTTDNYILVTIFMFVMPIALMNLLIGVAVGDIEK IQKQAYLTKIKIQVSDLCRTEERFPLYFQRKLYRQYDEIKPNLARKSFFNRNGTCTEYTDSDPGDDEVYV |
|