Gene
| Gene Model ID | pfu_aug1.0_11381.1_46371 |
|---|---|
| Locus | scaffold11381.1 : 9076 ... 18441 : + |
| To GenomeBrowser | scaffold11381.1:9076..18441 |
| Genes list of scaffold | scaffold11381.1 |
| Synonym | pfu_aug2.0_7.1_23209 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11381.1_46371.t1 | 1 | 1 | Pkinase | 46 | 96 | 1.2e-13 | 50.7 | 4.0e-17 | 1.5e-13 | 50.5 |
| pfu_aug1.0_11381.1_46371.t1 | 1 | 1 | Pkinase_Tyr | 47 | 96 | 5.9e-06 | 25.5 | 1.9e-09 | 7.2e-06 | 25.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11381.1_46371.t1 | gi|23308741|ref|NP_694420.1| | peripheral plasma membrane protein CASK [Danio rerio] | 2.0e-27 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_11381.1_46371.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11381.1_46371.t1 atgatcactttattagattgtggctatttgagaccttgtattgatctatggattctaggcggttataaacaattatttcg gtgttacccttcattttactatggttacgttttccaagttgcttttcctatacgtcgtcactacatgaagcagatcctag aggccctcaggtactgccatgccaacaacattgtacacagagacctaaagccacattgtgtactgctagcgtccaaagaa aactccgccccggtcaagctgggagggtttggtgtggctatacagctaccagagtcagggattatttctggtggtaagtt gggattcctagttgtgcggccttcattgaattga |
|
Protein
| Protein ID | pfu_aug1.0_11381.1_46371.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11381.1_46371.t1 MITLLDCGYLRPCIDLWILGGYKQLFRCYPSFYYGYVFQVAFPIRRHYMKQILEALRYCHANNIVHRDLKPHCVLLASKE NSAPVKLGGFGVAIQLPESGIISGGKLGFLVVRPSLN |
|