Gene
| Gene Model ID | pfu_aug1.0_11433.1_53697 |
|---|---|
| Locus | scaffold11433.1 : 4606 ... 15518 : + |
| To GenomeBrowser | scaffold11433.1:4606..15518 |
| Genes list of scaffold | scaffold11433.1 |
| Synonym | pfu_aug2.0_484.1_14212 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11433.1_53697.t1 | 1 | 1 | 2-oxoacid_dh | 175 | 277 | 2.6e-25 | 89.0 | 1.4e-28 | 3.6e-25 | 88.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11433.1_53697.t1 | gi|291238464|ref|XP_002739150.1| | PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_11433.1_53697.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11433.1_53697.t1 atgtatgctatttctagtggtcaagtaatgtaccaagtgaacaattattttgttgttgacagaacttcctctgattcaca ttgccaagtaaaggcaagttaccatctgcacagctcactttctttctttctgtttgggcaccccgcagccctctattgga cttctattcctgtaccaagccccgtagctggtatcatcgaagagttccttgtggaggatggtgacaaagttgaagggaat cagcctgtctataaactcaaattaacaggtgatgcacctccaccaaaaacagaagcagccccaaagaaggaagctgctgc cccaccccctgaagaaaagccaacacccccaccagctgatacaaagcctgcacccccatcatctacagcaggccccatcc ccacccaacctcctccttccactcctgtccccaaggcccccatgtcatccactcctgtgtcctctttgaaacctacacca gcccctgcatcagctcctgattcagctgtcaaaggtagcagaggagaaaccaggacaaagatgaacagaatgcgtaaaag gatagcccagaggttaaaggatgcccaaaattcatgtgctatgttgacaactttcaatgaagttgacatgagtaacttaa tggagatgaggaaactctacaaagatgcctttatgaagaagcataatctgaagctaggatttatgtcagcttttgttaaa gcatcagcatatgccttagaagatcaacctattgtgaacgcctacatagacgattctgaaatagtgtatcgggactataa agacatctcagtggctgtagcaacaccgaaggttatacacatcaaaggatttgtgattatgtgtagtattcctaggtgga tcttgaaagggttaacgccaaggggtttgctgattgtttaa |
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Protein
| Protein ID | pfu_aug1.0_11433.1_53697.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11433.1_53697.t1 MYAISSGQVMYQVNNYFVVDRTSSDSHCQVKASYHLHSSLSFFLFGHPAALYWTSIPVPSPVAGIIEEFLVEDGDKVEGN QPVYKLKLTGDAPPPKTEAAPKKEAAAPPPEEKPTPPPADTKPAPPSSTAGPIPTQPPPSTPVPKAPMSSTPVSSLKPTP APASAPDSAVKGSRGETRTKMNRMRKRIAQRLKDAQNSCAMLTTFNEVDMSNLMEMRKLYKDAFMKKHNLKLGFMSAFVK ASAYALEDQPIVNAYIDDSEIVYRDYKDISVAVATPKVIHIKGFVIMCSIPRWILKGLTPRGLLIV |
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