Gene
| Gene Model ID | pfu_aug1.0_11446.1_17763 |
|---|---|
| Locus | scaffold11446.1 : 1 ... 7655 : - |
| To GenomeBrowser | scaffold11446.1:1..7655 |
| Genes list of scaffold | scaffold11446.1 |
| Synonym | pfu_aug2.0_1436.1_21617 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11446.1_17763.t1 | 1 | 1 | BTB_2 | 17 | 103 | 2.7e-18 | 65.9 | 9.8e-22 | 4.8e-18 | 65.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11446.1_17763.t1 | gi|242001230|ref|XP_002435258.1| | TNF-alpha induced protein B12, putative [Ixodes scapularis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_11446.1_17763.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11446.1_17763.t1 atgtctggggaaactaaaactgtgataaaaggaaattcgtcgaaatatgtaaaactaaatgtgggagggtcccttcacta cacaacgatcgggaccctgaccaaacaagacactatgttgagagctatgttcagtggaagaatggaagttcttactgatt ccgaaggatggattttgatagacagaagtggtcggcattttggtctgattcttaattttctccgtgatggttcagctcct ttaccagagacaagaagagaattgatagaagttttacaggaagctaagtactacttggtacaggacttggttgccttgat agaagcagcgctgaccaaaatggacatgactatagaacccatatgtaaggtgcccctcattacgtcacatagggaggagc aacacctaatcacatctacacaaaagcctgtcgtaaaattaatatgtaacagacacaacaacaagtattcctacacaagt aattctgatgacaacttactgaagaatctggagttgtttgacaaactttctctgcggtttaatcgtcgtgtattatttgt gaaggatgtgataggaagtaacgagatttgttgttggttcttctacggacatggtacaaaaatagccgaggtctgctgca cgtctattgtgtatggtacagacaaaaaacacacaaaggttgagtttcctgaagccagaatatttgaagagacacttaat gtacttttatacgagaatcgtgctcggcctgacgatgaactgatgcaggccacacgcggcggtacggtgggtgctactgg ttaccatagtgatgatgatgctgatgataaactagacagagaagtacggatgagaagaaaataa |
|
Protein
| Protein ID | pfu_aug1.0_11446.1_17763.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11446.1_17763.t1 MSGETKTVIKGNSSKYVKLNVGGSLHYTTIGTLTKQDTMLRAMFSGRMEVLTDSEGWILIDRSGRHFGLILNFLRDGSAP LPETRRELIEVLQEAKYYLVQDLVALIEAALTKMDMTIEPICKVPLITSHREEQHLITSTQKPVVKLICNRHNNKYSYTS NSDDNLLKNLELFDKLSLRFNRRVLFVKDVIGSNEICCWFFYGHGTKIAEVCCTSIVYGTDKKHTKVEFPEARIFEETLN VLLYENRARPDDELMQATRGGTVGATGYHSDDDADDKLDREVRMRRK |
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