Gene
| Gene Model ID | pfu_aug1.0_11451.1_32058 |
|---|---|
| Locus | scaffold11451.1 : 4586 ... 21805 : + |
| To GenomeBrowser | scaffold11451.1:4586..21805 |
| Genes list of scaffold | scaffold11451.1 |
| Synonym | pfu_aug2.0_25.1_16740 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11451.1_32058.t1 | 2 | 1 | RRM_1 | 130 | 195 | 5.9e-25 | 86.6 | 3.9e-18 | 1.9e-14 | 53.0 |
| pfu_aug1.0_11451.1_32058.t1 | 2 | 1 | RRM_6 | 130 | 195 | 4.0e-22 | 77.9 | 7.4e-15 | 3.6e-11 | 42.8 |
| pfu_aug1.0_11451.1_32058.t1 | 2 | 1 | RRM_5 | 144 | 200 | 5.4e-09 | 35.7 | 8.1e-06 | 0.04 | 13.7 |
| pfu_aug1.0_11451.1_32058.t1 | 2 | 2 | RRM_1 | 216 | 265 | 5.9e-25 | 86.6 | 2.0e-11 | 9.9e-08 | 31.5 |
| pfu_aug1.0_11451.1_32058.t1 | 2 | 2 | RRM_6 | 216 | 269 | 4.0e-22 | 77.9 | 8.3e-12 | 4.1e-08 | 33.0 |
| pfu_aug1.0_11451.1_32058.t1 | 2 | 2 | RRM_5 | 230 | 266 | 5.4e-09 | 35.7 | 1.0e-07 | 0.0005 | 19.8 |
Transcript
| Transcript ID | pfu_aug1.0_11451.1_32058.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11451.1_32058.t1 atgacacagtacattcaagttgcagagattgaacatgatgaaccagttgaaataccgagtgaagatgacggatcactctt ggtatcaactctagccgctcaatttcctggtgcatgcggactcaaatatcgtaatccagacaccggtaatttccggggag tccggttgagtgaagggttgctgtatcccccggatggtgtatggggaagtcatgtctatgttgttgttttcccaaagttg caaccagctgtcacagttccagaaagatctgatgagggagaaattcattacataccaagtctttgtgacaacaagcgtaa aggagacaatgaacttgagaatccaagtgcaaagacgaagcgacttgagcagaagaaatgcacagacctcatagtccttg gactgccctggaaaagcacggaagatgacctgagaagctatttctccaagtttggtgacctcttgttgactcaggtgaaa agagaacctaaaactggtcaaagtaaaggttatggatttgtaagatttgcaaattacgactcgcagcttaaatgtctggc tcagagacatatgatagatggaagatggtgtgatgtcaacatacctaactcaaatgaaatgaatagccctccttcaaaca gaaaagttttcattgctcgatgctcggagaatatcaccgctgatcacctgcgggattatttcataaaatttggcgaggtc atcgacgttttcatacctaagccattcagggcctttgcttttgtcaccttccttgacccagaggttgcccagagcctgtg tggtgaagatcacatcatccaaggcactagtgtccatctaggaagaagtgactattatttggggaaagatgaaaattga |
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Protein
| Protein ID | pfu_aug1.0_11451.1_32058.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11451.1_32058.t1 MTQYIQVAEIEHDEPVEIPSEDDGSLLVSTLAAQFPGACGLKYRNPDTGNFRGVRLSEGLLYPPDGVWGSHVYVVVFPKL QPAVTVPERSDEGEIHYIPSLCDNKRKGDNELENPSAKTKRLEQKKCTDLIVLGLPWKSTEDDLRSYFSKFGDLLLTQVK REPKTGQSKGYGFVRFANYDSQLKCLAQRHMIDGRWCDVNIPNSNEMNSPPSNRKVFIARCSENITADHLRDYFIKFGEV IDVFIPKPFRAFAFVTFLDPEVAQSLCGEDHIIQGTSVHLGRSDYYLGKDEN |
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