Gene
| Gene Model ID | pfu_aug1.0_11471.1_68338 |
|---|---|
| Locus | scaffold11471.1 : 5107 ... 9235 : + |
| To GenomeBrowser | scaffold11471.1:5107..9235 |
| Genes list of scaffold | scaffold11471.1 |
| Synonym | pfu_aug2.0_221.1_03827 |
Manual annotation
| Study field | Environmental Response |
|---|---|
| Gene name | PDF receptor |
| Description | Homology to EGI59015.1| PDF receptor [Acromyrmex echinatior] |
| mRNA evidence |
| Study field | Environmental Response |
|---|---|
| Gene name | PDF receptor |
| Description | Homology to EGI59015.1| PDF receptor [Acromyrmex echinatior] |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11471.1_68338.t1 | 1 | 1 | HRM | 34 | 85 | 1.1e-13 | 51.0 | 4.6e-17 | 2.3e-13 | 49.9 |
| pfu_aug1.0_11471.1_68338.t1 | 1 | 1 | 7tm_2 | 144 | 380 | 3.0e-18 | 65.8 | 8.0e-22 | 3.9e-18 | 65.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11471.1_68338.t1 | gi|345493474|ref|XP_003427082.1| | PREDICTED: PDF receptor [Nasonia vitripennis] | 2.0e-25 |
Transcript
| Transcript ID | pfu_aug1.0_11471.1_68338.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11471.1_68338.t1 atgatgaatacgaaaattcgaggacagttttacccgtcaactttggaagaatgtttcgaaagtcaaggggatgcaccata ttcgattccacccgaaatgttctgcaatgcaacatgggacaccgttctctgctggccacctactttggtaggatcaacga cgaagttaccttgtccgaaatatctgaacctcggaactgggaaatatgcgtccaaatcatgtggaattaacggaaaatgg attggaattcatcctggaaagaacactttcccgaaagaactttacccaggctggacaaattactcggaatgtctcggtct ggactacgacatcaaaaatgtgaatgacagcacagattttaacgtttcagataaggcgcctgtgagtttaggcgcgcttc cattagcgcataacggcgccgatgttcttggttccatcatgcttatgatttctctgatattgctggtagcatcgcttgtg atcacctgttgctctcggacggtaagtacaacacggaccaagttgtataagaacttttttgctgcttttatcatacatga tactcttgaacttgtcatccgacttggacgttcagtagactcaaatgacgtagtaaatgacgtagaaacatgcgtttcta tcggcgtgatggttaccttgacaacctctgctatctacacttggcttgccatcattgccatatgttttacatttacaatg aaagggattgtcatagaaacaaaaatttactatatactgtgtcttctcggatggtttgtaccgaccgttgtgacaatcac gtggttaagcgtcacagttttggaaggaaatttgaattgctggtacggagaactttacatagcaaagcttgagtcaagtt tctggatcatagaatctatcaacataacactgctctgttcgacgtgggtcttgttgatacattttctatggaaattcaac gaacacaaatcacacaggcaattttcagataacaaggagctttgcgccgagatgactttcataaagcagagtgcattcaa agttcttgtggttctatgctttgtaactgcagcttatatcatttacgtcacttcctctcaggataaactttcggaaccta tcgcttacgcattggttttgacattattttcccgcgggataacgacggccatatttctgtgtttcttggaggagagttgt aaatgttgggacggtgtgtattccgtggagaattcttctgaagaggagagcatctacagtacgttacctacctga |
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Protein
| Protein ID | pfu_aug1.0_11471.1_68338.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11471.1_68338.t1 MMNTKIRGQFYPSTLEECFESQGDAPYSIPPEMFCNATWDTVLCWPPTLVGSTTKLPCPKYLNLGTGKYASKSCGINGKW IGIHPGKNTFPKELYPGWTNYSECLGLDYDIKNVNDSTDFNVSDKAPVSLGALPLAHNGADVLGSIMLMISLILLVASLV ITCCSRTVSTTRTKLYKNFFAAFIIHDTLELVIRLGRSVDSNDVVNDVETCVSIGVMVTLTTSAIYTWLAIIAICFTFTM KGIVIETKIYYILCLLGWFVPTVVTITWLSVTVLEGNLNCWYGELYIAKLESSFWIIESINITLLCSTWVLLIHFLWKFN EHKSHRQFSDNKELCAEMTFIKQSAFKVLVVLCFVTAAYIIYVTSSQDKLSEPIAYALVLTLFSRGITTAIFLCFLEESC KCWDGVYSVENSSEEESIYSTLPT |
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