Gene
Gene Model ID | pfu_aug1.0_11471.1_68338 |
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Locus | scaffold11471.1 : 5107 ... 9235 : + |
To GenomeBrowser | scaffold11471.1:5107..9235 |
Genes list of scaffold | scaffold11471.1 |
Synonym | pfu_aug2.0_221.1_03827 |
Manual annotation
Study field | Environmental Response |
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Gene name | PDF receptor |
Description | Homology to EGI59015.1| PDF receptor [Acromyrmex echinatior] |
mRNA evidence |
Study field | Environmental Response |
---|---|
Gene name | PDF receptor |
Description | Homology to EGI59015.1| PDF receptor [Acromyrmex echinatior] |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_11471.1_68338.t1 | 1 | 1 | HRM | 34 | 85 | 1.1e-13 | 51.0 | 4.6e-17 | 2.3e-13 | 49.9 |
pfu_aug1.0_11471.1_68338.t1 | 1 | 1 | 7tm_2 | 144 | 380 | 3.0e-18 | 65.8 | 8.0e-22 | 3.9e-18 | 65.4 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_11471.1_68338.t1 | gi|345493474|ref|XP_003427082.1| | PREDICTED: PDF receptor [Nasonia vitripennis] | 2.0e-25 |
Transcript
Transcript ID | pfu_aug1.0_11471.1_68338.t1 |
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Definition | - |
>pfu_aug1.0_11471.1_68338.t1 atgatgaatacgaaaattcgaggacagttttacccgtcaactttggaagaatgtttcgaaagtcaaggggatgcaccata ttcgattccacccgaaatgttctgcaatgcaacatgggacaccgttctctgctggccacctactttggtaggatcaacga cgaagttaccttgtccgaaatatctgaacctcggaactgggaaatatgcgtccaaatcatgtggaattaacggaaaatgg attggaattcatcctggaaagaacactttcccgaaagaactttacccaggctggacaaattactcggaatgtctcggtct ggactacgacatcaaaaatgtgaatgacagcacagattttaacgtttcagataaggcgcctgtgagtttaggcgcgcttc cattagcgcataacggcgccgatgttcttggttccatcatgcttatgatttctctgatattgctggtagcatcgcttgtg atcacctgttgctctcggacggtaagtacaacacggaccaagttgtataagaacttttttgctgcttttatcatacatga tactcttgaacttgtcatccgacttggacgttcagtagactcaaatgacgtagtaaatgacgtagaaacatgcgtttcta tcggcgtgatggttaccttgacaacctctgctatctacacttggcttgccatcattgccatatgttttacatttacaatg aaagggattgtcatagaaacaaaaatttactatatactgtgtcttctcggatggtttgtaccgaccgttgtgacaatcac gtggttaagcgtcacagttttggaaggaaatttgaattgctggtacggagaactttacatagcaaagcttgagtcaagtt tctggatcatagaatctatcaacataacactgctctgttcgacgtgggtcttgttgatacattttctatggaaattcaac gaacacaaatcacacaggcaattttcagataacaaggagctttgcgccgagatgactttcataaagcagagtgcattcaa agttcttgtggttctatgctttgtaactgcagcttatatcatttacgtcacttcctctcaggataaactttcggaaccta tcgcttacgcattggttttgacattattttcccgcgggataacgacggccatatttctgtgtttcttggaggagagttgt aaatgttgggacggtgtgtattccgtggagaattcttctgaagaggagagcatctacagtacgttacctacctga |
Protein
Protein ID | pfu_aug1.0_11471.1_68338.t1 |
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Definition | - |
>pfu_aug1.0_11471.1_68338.t1 MMNTKIRGQFYPSTLEECFESQGDAPYSIPPEMFCNATWDTVLCWPPTLVGSTTKLPCPKYLNLGTGKYASKSCGINGKW IGIHPGKNTFPKELYPGWTNYSECLGLDYDIKNVNDSTDFNVSDKAPVSLGALPLAHNGADVLGSIMLMISLILLVASLV ITCCSRTVSTTRTKLYKNFFAAFIIHDTLELVIRLGRSVDSNDVVNDVETCVSIGVMVTLTTSAIYTWLAIIAICFTFTM KGIVIETKIYYILCLLGWFVPTVVTITWLSVTVLEGNLNCWYGELYIAKLESSFWIIESINITLLCSTWVLLIHFLWKFN EHKSHRQFSDNKELCAEMTFIKQSAFKVLVVLCFVTAAYIIYVTSSQDKLSEPIAYALVLTLFSRGITTAIFLCFLEESC KCWDGVYSVENSSEEESIYSTLPT |