Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_11483.1_24899
Locus scaffold11483.1 : 36569 ... 45555 : -
To GenomeBrowser scaffold11483.1:36569..45555
Genes list of scaffold scaffold11483.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_11483.1_24899.t1 1 1 CTP_transf_2 5 67 7.1e-07 29.4 5.9e-11 8.7e-07 29.1

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_11483.1_24899.t1 gi|307191877|gb|EFN75296.1| Ethanolamine-phosphate cytidylyltransferase [Harpegnathos saltator] 3.0e-33

Transcript
Transcript IDpfu_aug1.0_11483.1_24899.t1
Definition-
>pfu_aug1.0_11483.1_24899.t1
atgttcatgcatgtatttatacttacagaggaaatctccaaacataagggaccacctgtgtttaatgaacatgagaggta
taagatggttagagccattaaatgggttgatgaggttatagaagaagctccctatgtaaccacattggaaactctggaca
aatataacgccgatttctgtgtccatggagatgacataactactacagctgatggtcaggatacataccacattgttaaa
ggtgccggcagatacaagtaa

Protein
Protein IDpfu_aug1.0_11483.1_24899.t1
Definition-
>pfu_aug1.0_11483.1_24899.t1
MFMHVFILTEEISKHKGPPVFNEHERYKMVRAIKWVDEVIEEAPYVTTLETLDKYNADFCVHGDDITTTADGQDTYHIVK
GAGRYK

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