Gene
| Gene Model ID | pfu_aug1.0_11485.1_68340 |
|---|---|
| Locus | scaffold11485.1 : 5773 ... 12975 : - |
| To GenomeBrowser | scaffold11485.1:5773..12975 |
| Genes list of scaffold | scaffold11485.1 |
| Synonym | pfu_aug2.0_224.1_13833 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11485.1_68340.t1 | 7 | 1 | LRR_8 | 73 | 130 | 3.4e-30 | 103.5 | 6.2e-08 | 0.00015 | 21.4 |
| pfu_aug1.0_11485.1_68340.t1 | 11 | 1 | LRR_1 | 73 | 81 | 1.2e-14 | 52.0 | 0.59 | 1400.0 | 0.0 |
| pfu_aug1.0_11485.1_68340.t1 | 8 | 1 | LRR_6 | 95 | 108 | 1.0e-06 | 28.1 | 0.0071 | 18.0 | 5.8 |
| pfu_aug1.0_11485.1_68340.t1 | 7 | 2 | LRR_8 | 96 | 135 | 3.4e-30 | 103.5 | 2.4e-08 | 5.9e-05 | 22.7 |
| pfu_aug1.0_11485.1_68340.t1 | 8 | 1 | LRR_4 | 96 | 131 | 3.6e-23 | 80.7 | 1.8e-08 | 4.5e-05 | 22.9 |
| pfu_aug1.0_11485.1_68340.t1 | 11 | 2 | LRR_1 | 96 | 116 | 1.2e-14 | 52.0 | 0.00034 | 0.85 | 9.8 |
| pfu_aug1.0_11485.1_68340.t1 | 9 | 1 | LRR_7 | 96 | 108 | 5.7e-08 | 31.7 | 0.0056 | 14.0 | 6.4 |
| pfu_aug1.0_11485.1_68340.t1 | 8 | 2 | LRR_6 | 117 | 130 | 1.0e-06 | 28.1 | 9.7e-05 | 0.24 | 11.5 |
| pfu_aug1.0_11485.1_68340.t1 | 9 | 2 | LRR_7 | 118 | 131 | 5.7e-08 | 31.7 | 0.00068 | 1.7 | 9.2 |
| pfu_aug1.0_11485.1_68340.t1 | 11 | 3 | LRR_1 | 119 | 132 | 1.2e-14 | 52.0 | 0.00011 | 0.27 | 11.4 |
| pfu_aug1.0_11485.1_68340.t1 | 8 | 2 | LRR_4 | 146 | 162 | 3.6e-23 | 80.7 | 0.023 | 56.0 | 3.5 |
| pfu_aug1.0_11485.1_68340.t1 | 11 | 4 | LRR_1 | 146 | 161 | 1.2e-14 | 52.0 | 0.071 | 180.0 | 2.8 |
| pfu_aug1.0_11485.1_68340.t1 | 7 | 3 | LRR_8 | 164 | 201 | 3.4e-30 | 103.5 | 0.029 | 72.0 | 3.2 |
| pfu_aug1.0_11485.1_68340.t1 | 8 | 3 | LRR_4 | 164 | 187 | 3.6e-23 | 80.7 | 0.32 | 790.0 | -0.2 |
| pfu_aug1.0_11485.1_68340.t1 | 8 | 3 | LRR_6 | 210 | 224 | 1.0e-06 | 28.1 | 0.039 | 96.0 | 3.5 |
| pfu_aug1.0_11485.1_68340.t1 | 7 | 4 | LRR_8 | 211 | 248 | 3.4e-30 | 103.5 | 2.9e-05 | 0.072 | 12.8 |
| pfu_aug1.0_11485.1_68340.t1 | 8 | 4 | LRR_4 | 212 | 251 | 3.6e-23 | 80.7 | 9.4e-10 | 2.3e-06 | 27.0 |
| pfu_aug1.0_11485.1_68340.t1 | 11 | 5 | LRR_1 | 212 | 227 | 1.2e-14 | 52.0 | 0.15 | 370.0 | 1.8 |
| pfu_aug1.0_11485.1_68340.t1 | 8 | 4 | LRR_6 | 232 | 247 | 1.0e-06 | 28.1 | 0.00019 | 0.47 | 10.6 |
| pfu_aug1.0_11485.1_68340.t1 | 11 | 6 | LRR_1 | 235 | 249 | 1.2e-14 | 52.0 | 0.00025 | 0.63 | 10.2 |
| pfu_aug1.0_11485.1_68340.t1 | 9 | 3 | LRR_7 | 236 | 247 | 5.7e-08 | 31.7 | 0.0047 | 12.0 | 6.6 |
| pfu_aug1.0_11485.1_68340.t1 | 8 | 5 | LRR_4 | 254 | 271 | 3.6e-23 | 80.7 | 0.023 | 58.0 | 3.4 |
| pfu_aug1.0_11485.1_68340.t1 | 7 | 5 | LRR_8 | 256 | 301 | 3.4e-30 | 103.5 | 7.4e-10 | 1.8e-06 | 27.5 |
| pfu_aug1.0_11485.1_68340.t1 | 9 | 4 | LRR_7 | 256 | 271 | 5.7e-08 | 31.7 | 0.06 | 150.0 | 3.3 |
| pfu_aug1.0_11485.1_68340.t1 | 8 | 5 | LRR_6 | 256 | 269 | 1.0e-06 | 28.1 | 0.3 | 730.0 | 0.8 |
| pfu_aug1.0_11485.1_68340.t1 | 8 | 6 | LRR_4 | 281 | 297 | 3.6e-23 | 80.7 | 0.0073 | 18.0 | 5.0 |
| pfu_aug1.0_11485.1_68340.t1 | 11 | 7 | LRR_1 | 281 | 301 | 1.2e-14 | 52.0 | 0.0036 | 8.9 | 6.7 |
| pfu_aug1.0_11485.1_68340.t1 | 8 | 6 | LRR_6 | 281 | 294 | 1.0e-06 | 28.1 | 0.017 | 43.0 | 4.6 |
| pfu_aug1.0_11485.1_68340.t1 | 9 | 5 | LRR_7 | 283 | 295 | 5.7e-08 | 31.7 | 0.15 | 370.0 | 2.1 |
| pfu_aug1.0_11485.1_68340.t1 | 7 | 6 | LRR_8 | 306 | 365 | 3.4e-30 | 103.5 | 3.4e-12 | 8.3e-09 | 35.0 |
| pfu_aug1.0_11485.1_68340.t1 | 8 | 7 | LRR_4 | 306 | 341 | 3.6e-23 | 80.7 | 3.6e-07 | 0.0009 | 18.8 |
| pfu_aug1.0_11485.1_68340.t1 | 11 | 8 | LRR_1 | 306 | 328 | 1.2e-14 | 52.0 | 0.00023 | 0.56 | 10.4 |
| pfu_aug1.0_11485.1_68340.t1 | 9 | 6 | LRR_7 | 306 | 315 | 5.7e-08 | 31.7 | 0.012 | 30.0 | 5.4 |
| pfu_aug1.0_11485.1_68340.t1 | 8 | 7 | LRR_6 | 306 | 318 | 1.0e-06 | 28.1 | 0.032 | 79.0 | 3.7 |
| pfu_aug1.0_11485.1_68340.t1 | 9 | 7 | LRR_7 | 327 | 342 | 5.7e-08 | 31.7 | 0.29 | 720.0 | 1.2 |
| pfu_aug1.0_11485.1_68340.t1 | 11 | 9 | LRR_1 | 331 | 352 | 1.2e-14 | 52.0 | 0.0042 | 10.0 | 6.5 |
| pfu_aug1.0_11485.1_68340.t1 | 7 | 7 | LRR_8 | 354 | 405 | 3.4e-30 | 103.5 | 1.4e-10 | 3.5e-07 | 29.8 |
| pfu_aug1.0_11485.1_68340.t1 | 8 | 8 | LRR_4 | 355 | 389 | 3.6e-23 | 80.7 | 1.2e-06 | 0.003 | 17.1 |
| pfu_aug1.0_11485.1_68340.t1 | 11 | 10 | LRR_1 | 355 | 376 | 1.2e-14 | 52.0 | 0.0005 | 1.2 | 9.4 |
| pfu_aug1.0_11485.1_68340.t1 | 9 | 8 | LRR_7 | 355 | 369 | 5.7e-08 | 31.7 | 0.064 | 160.0 | 3.2 |
| pfu_aug1.0_11485.1_68340.t1 | 8 | 8 | LRR_6 | 376 | 389 | 1.0e-06 | 28.1 | 0.0089 | 22.0 | 5.5 |
| pfu_aug1.0_11485.1_68340.t1 | 11 | 11 | LRR_1 | 378 | 390 | 1.2e-14 | 52.0 | 0.016 | 39.0 | 4.8 |
| pfu_aug1.0_11485.1_68340.t1 | 9 | 9 | LRR_7 | 378 | 389 | 5.7e-08 | 31.7 | 0.079 | 190.0 | 2.9 |
Transcript
| Transcript ID | pfu_aug1.0_11485.1_68340.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11485.1_68340.t1 atgtgtaatcctacgcggaagtgccccggatcatcatctgaatgtgattggaatgcagtttgcctccaccaacatgaaat ttgcgacggaatcgcaaattgcccctacatggatgacgagttgaattgtaaattgagctgtccacctggatgttacagct gtatagataacaagtacaaatgttctccttcagcgattgattcccttcatgctggaattacttatctcgacatatctgga caccctttcaacattacgcgaatctgttccaaaacatttttgactttgacgtatcttaatgtttcacgttgtcgtctgtc aaatgtttcctgcctatttaataacttacttccatcactgcgagtcctcgatttgtcatacaacaatatcaaagtcatgg aacgatataactttcctttcagggatctcggtacaattttataccttgatggtaaccccattgttgccatggaaacgttt caaaactggaaaacgttatcaataagaaacgcatcgttgaaaaatgtaaaatggagtgaacgacttggtggtttgctgtc cctgaattttaatgttacaaactcaagcaaaattattccaccaaaatactatcggggttcatctgccagcagcgtggaat ctgtggattttagctacaatgacataagatctatagcgtttctcaaatttttcagtacaatccactctctagatctgtca aataataaattgtcagatttgtcagaattaccacagatttcactcccgtaccttaaacaattccatctgatggataacaa aatcgatcacataaattcgacattctttgagagaaaagaatctattgaagttctgaacttagcaaggaatgatataaata ctattgacgatcattgttttcagccaattaaatttaatttacgtaacttgagtctcaacaataacgttatcttttctctg ccatctgccgttttccagaatttgacaaaacttttactgttagatttgcgaagaaaccgtttgaatctattacattctga tatttttcaagaccttatagaactgcgtattttacttcttaatgacaatagattgtcaagttttccaaagaagatcttca aaaccctgtactccttagaagaattaaatatagcagggaatgatattccggtttacgaaaagatgtttacgggacttgga gtattacgtatactgaaggagacgctgactctcctcgggcacctggtctcacttcggaattttgttcattccgaggttcg caactgttcctgtggaaaatctaataattttgccttgccttctcgactatga |
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Protein
| Protein ID | pfu_aug1.0_11485.1_68340.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11485.1_68340.t1 MCNPTRKCPGSSSECDWNAVCLHQHEICDGIANCPYMDDELNCKLSCPPGCYSCIDNKYKCSPSAIDSLHAGITYLDISG HPFNITRICSKTFLTLTYLNVSRCRLSNVSCLFNNLLPSLRVLDLSYNNIKVMERYNFPFRDLGTILYLDGNPIVAMETF QNWKTLSIRNASLKNVKWSERLGGLLSLNFNVTNSSKIIPPKYYRGSSASSVESVDFSYNDIRSIAFLKFFSTIHSLDLS NNKLSDLSELPQISLPYLKQFHLMDNKIDHINSTFFERKESIEVLNLARNDINTIDDHCFQPIKFNLRNLSLNNNVIFSL PSAVFQNLTKLLLLDLRRNRLNLLHSDIFQDLIELRILLLNDNRLSSFPKKIFKTLYSLEELNIAGNDIPVYEKMFTGLG VLRILKETLTLLGHLVSLRNFVHSEVRNCSCGKSNNFALPSRL |
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