Gene
| Gene Model ID | pfu_aug1.0_11493.1_53706 |
|---|---|
| Locus | scaffold11493.1 : 6576 ... 14778 : + |
| To GenomeBrowser | scaffold11493.1:6576..14778 |
| Genes list of scaffold | scaffold11493.1 |
| Synonym | pfu_aug2.0_970.1_01292 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11493.1_53706.t1 | 1 | 1 | Ependymin | 37 | 167 | 9.1e-27 | 93.3 | 7.2e-31 | 1.1e-26 | 93.1 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 2 |
| >Adult tissues | |
| Dshape | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_11493.1_53706.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11493.1_53706.t1 atgattgctttgttagcagtttgtcttctggcggtggatagaagcaaacaatttgagcgatatggcaaaatcagctacga tgagtacgcaccaagattccgtataattgaggaggagagagaaggatccaccgaagaattctacgacaggctttaccttc ataatgttggcaaagaatacagcttgaatttgaagaccagaaaatgcaacgtgaccagtcttacccgcccattcagacca ttcggtgtcccaccagaggccaaattcacaggtgaagccacaattggcgccgccggtgtacctggtgaaagtgttgtcat cgaaaattttgatggtgaattcagcgatggtgataaattctttggtgacgtcacatacccagattgtgttccagtagcca atggcgtgttttctaaagaatttggatttgtcatgaatagtttctttgatatcaacgttggtattgctgacccaatggtt tttgtaccacctccggaatgtgccggccgttaa |
|
Protein
| Protein ID | pfu_aug1.0_11493.1_53706.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11493.1_53706.t1 MIALLAVCLLAVDRSKQFERYGKISYDEYAPRFRIIEEEREGSTEEFYDRLYLHNVGKEYSLNLKTRKCNVTSLTRPFRP FGVPPEAKFTGEATIGAAGVPGESVVIENFDGEFSDGDKFFGDVTYPDCVPVANGVFSKEFGFVMNSFFDINVGIADPMV FVPPPECAGR |
|