Gene
| Gene Model ID | pfu_aug1.0_115.1_07387 |
|---|---|
| Locus | scaffold115.1 : 54906 ... 69882 : + |
| To GenomeBrowser | scaffold115.1:54906..69882 |
| Genes list of scaffold | scaffold115.1 |
| Synonym | pfu_aug2.0_297.1_23833 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_115.1_07387.t1 | 1 | 1 | Na_K-ATPase | 36 | 322 | 0.0 | 217.1 | 0.0 | 0.0 | 216.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_115.1_07387.t1 | gi|134141892|gb|ABO61330.1| | Na+/K+ ATPase beta subunit [Doryteuthis pealeii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 2 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_115.1_07387.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_115.1_07387.t1 atgattcgatttgtccacaactgcaatacggatcaggtttcagaaatggcgtcgagtgcaagtacaggtgttgagacaac tacaacgatccctccatctaatccttcccttaaacagagaattgatgattttctaacctttctttataatggcgaggaag ggactgtactcggaagaacagcaatcagttggggtcagattgggctgttttacctcatttactactcatgtctagctggt ttctttgccgccatgatggctgtattctatcaaacattagactggaacttccctaggttacagggaccagacactcttct aaaacaaaacccaggaatgggattccgtccattgcctgatgtagggacaacacttgtgagatttgtgaaagctgacgcct ctacatattcaccatacaccgaccacatagaagcctacttggaatactatgagaatcagaacttgggatcccaggatggt ggacaggtggctgattgtaaatcagtaactggacgtcgtgaccctaaggactgggataaagcctgtcagtttgacttaat tgaccttggtgccgactgtatcaaacagcaagcttttggatttgatgatggaatgccttgtatcctgcttaaattgaaca gaatatttgattggcagccagaatcattctccaatgccagtgtaccatcagcagtccaagggcagtgggaacctttccat attactgttaaatgtacaggcgagaacccctcggatgttgacaatattggacccattgaatactacccctccggaggttt ccattttaagtatttccctttccgcaatcagcagacctataggtctccattggttatggctcgcttcgtgagacccaccc caggagtacttgtaatggtggaatgtagggcctacgcaagaaacatcaaacatgataaacttgaacgggctggaatggtt cattttgaattgatggtagattaa |
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Protein
| Protein ID | pfu_aug1.0_115.1_07387.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_115.1_07387.t1 MIRFVHNCNTDQVSEMASSASTGVETTTTIPPSNPSLKQRIDDFLTFLYNGEEGTVLGRTAISWGQIGLFYLIYYSCLAG FFAAMMAVFYQTLDWNFPRLQGPDTLLKQNPGMGFRPLPDVGTTLVRFVKADASTYSPYTDHIEAYLEYYENQNLGSQDG GQVADCKSVTGRRDPKDWDKACQFDLIDLGADCIKQQAFGFDDGMPCILLKLNRIFDWQPESFSNASVPSAVQGQWEPFH ITVKCTGENPSDVDNIGPIEYYPSGGFHFKYFPFRNQQTYRSPLVMARFVRPTPGVLVMVECRAYARNIKHDKLERAGMV HFELMVD |
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