Gene
| Gene Model ID | pfu_aug1.0_115.1_07391 |
|---|---|
| Locus | scaffold115.1 : 126504 ... 130375 : - |
| To GenomeBrowser | scaffold115.1:126504..130375 |
| Genes list of scaffold | scaffold115.1 |
| Synonym | pfu_aug2.0_297.1_23830 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_115.1_07391.t1 | 1 | 1 | DEAD | 102 | 248 | 2.7e-30 | 105.0 | 1.2e-31 | 2.5e-28 | 98.6 |
| pfu_aug1.0_115.1_07391.t1 | 2 | 1 | Helicase_C | 237 | 263 | 8.3e-26 | 89.6 | 0.62 | 1300.0 | -0.7 |
| pfu_aug1.0_115.1_07391.t1 | 2 | 2 | Helicase_C | 319 | 394 | 8.3e-26 | 89.6 | 2.0e-28 | 4.2e-25 | 87.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_115.1_07391.t1 | gi|189237234|ref|XP_970515.2| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_115.1_07391.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_115.1_07391.t1 atgagtttaacagaaactaaagtaacagaaggttactccgataaaacacccgagactcgttctcacgagggcaacgcccc tccccacggggagaaaaaaagggatcctattgactggagtgctgacaacacagaactagatccacagaccgaggaccaat acggatcgaacttcaagaatgtgcaacaagatgggaacaccgaagtcaaggaagagtatggagaggcacaggaatttgat cagatgggcctggctgacgaactcctgaaggggatatatgcctatgggtacgagaaaccctccatgatccaacaaaaggc cataccacaatgtcttacagggcgtgatgtgatagcacaggctcagtccggtactggtaagacagccacgttctccgtgg gcgtgcttcagagactggacattgaggacaagagatgccaagccctcattctggcccccaccagggaactagccatccag acccatcgtgtggtgacagcccttggggactatatgggtgtggtatgtcacgcctttgtgggaggacgcagagtcagcga ggacgtggccatgatccgccgtggaatccatgtggacccagagagcattcgtatgtttgtgatggacgaagctgatgaga tgttgtccaaaggattcctggatcaaatatacgatctgttccagtttcttcccagagaaatccaggtgatccttgtgtct gccaccatgccaagggaaatcatggatatcacctcacgcttcatgaacaacccagtaaagattctagtaaagaacgaaga gcttacactcagtggtatacaccagttctatgtcaacgtcgaacgagaggattggaagtttgagacgctgtgtgacttat acgaggccatctccattaaacagtcggtgatattctgtaacagtcggcgtaacgtagagtggctaacccaagccctcgat gacagagacttcacggtgtcatctgtgcatggggatatgagccaggatacaagggagaccatcatgcacggcttccgtac cggctccagtcgtgtactgatcactacagacctactggccaggggtatagatgtacaacaagtgtccttggtactcaact atgacctacccatagatagggaatcctacatacacagaattggtcgcggtggcagatttggtcgaaagggtgtggccatc aactttgtgaccaatgacaacctaagacaactgagagagctggagcagttctacaacacccagatcgaggaaatgccaag gaacatagctgatgttatagagccctattga |
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Protein
| Protein ID | pfu_aug1.0_115.1_07391.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_115.1_07391.t1 MSLTETKVTEGYSDKTPETRSHEGNAPPHGEKKRDPIDWSADNTELDPQTEDQYGSNFKNVQQDGNTEVKEEYGEAQEFD QMGLADELLKGIYAYGYEKPSMIQQKAIPQCLTGRDVIAQAQSGTGKTATFSVGVLQRLDIEDKRCQALILAPTRELAIQ THRVVTALGDYMGVVCHAFVGGRRVSEDVAMIRRGIHVDPESIRMFVMDEADEMLSKGFLDQIYDLFQFLPREIQVILVS ATMPREIMDITSRFMNNPVKILVKNEELTLSGIHQFYVNVEREDWKFETLCDLYEAISIKQSVIFCNSRRNVEWLTQALD DRDFTVSSVHGDMSQDTRETIMHGFRTGSSRVLITTDLLARGIDVQQVSLVLNYDLPIDRESYIHRIGRGGRFGRKGVAI NFVTNDNLRQLRELEQFYNTQIEEMPRNIADVIEPY |
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