Gene
| Gene Model ID | pfu_aug1.0_115.1_07392 |
|---|---|
| Locus | scaffold115.1 : 130780 ... 156355 : - |
| To GenomeBrowser | scaffold115.1:130780..156355 |
| Genes list of scaffold | scaffold115.1 |
| Synonym | pfu_aug2.0_297.1_23829 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_115.1_07392.t1 | 1 | 1 | DEAD | 183 | 348 | 1.49939e-43 | 148.2 | 0.0 | 2.90069e-43 | 147.2 |
| pfu_aug1.0_115.1_07392.t1 | 2 | 1 | Helicase_C | 339 | 364 | 3.8e-27 | 93.9 | 0.91 | 1200.0 | -0.6 |
| pfu_aug1.0_115.1_07392.t1 | 2 | 2 | Helicase_C | 423 | 495 | 3.8e-27 | 93.9 | 2.0e-29 | 2.7e-26 | 91.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_115.1_07392.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_115.1_07392.t1 atgtacggtggcgaatttgtccacaacattgcaagttttggtgatgaatattttgtaaaagtctcgaaaaagtctacaaa cctgttttggagagatgttttcttggagtggggtaaagtagtaaaatcaagttatcacattgcattttcttttgagagtt ctaacgatacttccattacaatttggtataactcatttttgaaggttaatcacaacagcgttttctttaaatcatggttt gagaaaggtatcaaatttgttcatgactttcttgatgaaaatggacatatccttcgaaaaggggagcgcaataatgtaga cgttcctttattcgcggtacacagcgagaacatgtcatataattcggaagatggagataggtctcaacaagtgagatcgg aaggtgacgttaaggaagagtatgtcccagaagcaggtggtctcattgagagcaactgggatgaagttgttgacagtttt gatgatatgcatttgagggaagagttactcagaggaatttatgcctatggatttgagaaaccctcggctattcaacagag agctattattccttgtcttaaaggaaaggatgtgatagctcaagcccagtctggtactggaaaaacagccactttctcca ttgcaattcttcagcagcttcaagtacagtcacctgacaggaaagaatgtcaagcccttgtcttggctccgacccgggaa cttgcccaacagattcagaaagtagtgatagcactaggagattatttagatgcatcctgccatgcatgtataggtggcac caatgttaaagaggatatacatcggcttggtgcaggtgtagatatcgtggttgggacaccaggacgtgttcatgacatga ttaatagaagggcattgaatcccagatcgatacggatgtttgtccttgatgaggccgatgaaatgttgtcgcgaggtttc aaagatcagatctacgatgtgtttagattcatgcctcaagaaactcaggtaatcctgttgtctgccaccatgcctgctga ggtgttagaggtcaccaagaggttcatgagggatccaatcaggattctcgtcaagaaagaggaacttacccttgagggta tccgacagttctacattcaagtagaaagagaggaatggaaactggataccttgtgtgatttatacgagacattaactata actcaagctgttatattctgtaatacaagaaggaaggtagactggcttacagacaagatgttgagcagggattttacagt ttctgccatgcacggagacatggatcaaaaggagcgtgatgtaatcatgcgtgagttcaggaccggttctagtcgtgtgc tcattactacagatctgctagctcgtggtatagatgtacagcaagtatctcttgtcatcaactacgatctacccgccaac agggaaaactacatacacagaattggacgtggtggtcgatttggacgtaaaggtgttgccataaacttcgttacacaaga tgacgtccgtacattgcgtgatatagaacagttttacaacactcaaattgaagaaatgcccatgaatgtagctgatttga tctaa |
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Protein
| Protein ID | pfu_aug1.0_115.1_07392.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_115.1_07392.t1 MYGGEFVHNIASFGDEYFVKVSKKSTNLFWRDVFLEWGKVVKSSYHIAFSFESSNDTSITIWYNSFLKVNHNSVFFKSWF EKGIKFVHDFLDENGHILRKGERNNVDVPLFAVHSENMSYNSEDGDRSQQVRSEGDVKEEYVPEAGGLIESNWDEVVDSF DDMHLREELLRGIYAYGFEKPSAIQQRAIIPCLKGKDVIAQAQSGTGKTATFSIAILQQLQVQSPDRKECQALVLAPTRE LAQQIQKVVIALGDYLDASCHACIGGTNVKEDIHRLGAGVDIVVGTPGRVHDMINRRALNPRSIRMFVLDEADEMLSRGF KDQIYDVFRFMPQETQVILLSATMPAEVLEVTKRFMRDPIRILVKKEELTLEGIRQFYIQVEREEWKLDTLCDLYETLTI TQAVIFCNTRRKVDWLTDKMLSRDFTVSAMHGDMDQKERDVIMREFRTGSSRVLITTDLLARGIDVQQVSLVINYDLPAN RENYIHRIGRGGRFGRKGVAINFVTQDDVRTLRDIEQFYNTQIEEMPMNVADLI |
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