Gene
| Gene Model ID | pfu_aug1.0_11517.1_39191 |
|---|---|
| Locus | scaffold11517.1 : 1 ... 25586 : + |
| To GenomeBrowser | scaffold11517.1:1..25586 |
| Genes list of scaffold | scaffold11517.1 |
| Synonym | pfu_aug2.0_98.1_26832 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11517.1_39191.t1 | 1 | 1 | SH3_2 | 38 | 87 | 5.1e-11 | 41.8 | 3.1e-14 | 9.3e-11 | 41.0 |
| pfu_aug1.0_11517.1_39191.t1 | 1 | 1 | SH3_1 | 39 | 84 | 4.1e-16 | 58.1 | 2.2e-19 | 6.4e-16 | 57.4 |
| pfu_aug1.0_11517.1_39191.t1 | 1 | 1 | SH3_9 | 40 | 88 | 1.5e-11 | 43.6 | 8.2e-15 | 2.4e-11 | 43.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11517.1_39191.t1 | gi|291239797|ref|XP_002739807.1| | PREDICTED: signal transducing adapter molecule 1-like [Saccoglossus kowalevskii] | 2.0e-34 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_11517.1_39191.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11517.1_39191.t1 gcacatccaaaagttgcacagcgactgcggcacatggttaagaagtggtcagagtctaaggagtttaaagatgatccttc attaagtagtaaacctagagaggtccgcaaagtacgtgctttgtatgactttgaggcggcagaagataatgaacttacct ttaaagcaggagagtttatcagtgttactgatgatagtgatgtaaattggtggaaaggttttaatcaaagaggagaagga ctttttcctgcaaattttgtgacatctgatctcacagtggaaccagaaaaagagaagaaagttcagttcaatgaggaagt acaagtaaagacagtagagcctgccccagaagatgtagaaatagatgagtccatgtacaatggtcagccccagtatatgg ccccgcccagtcagccccctatgtcagctcagggtcctatgccccccatggcaattccatctcatagttatgctagccag actttcacaagtacaaatagtagccatatgtacaatggaacagtaccatcccaaagtgcaatgcaacagccaacctccca gaatcccatgccacaaatggtggcacctagtgttggacaaccacaaccaaacattcaaggaaacattgctcctaacattc aaggaaatgttgccccaccacaaaatttacaaaataccgtcacttcggcacagcagaactttaatactaattataatgga cctccgttaggggtcaatcaacagttctatcaacctccaccacagcaacagccattgttatga |
|
Protein
| Protein ID | pfu_aug1.0_11517.1_39191.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11517.1_39191.t1 AHPKVAQRLRHMVKKWSESKEFKDDPSLSSKPREVRKVRALYDFEAAEDNELTFKAGEFISVTDDSDVNWWKGFNQRGEG LFPANFVTSDLTVEPEKEKKVQFNEEVQVKTVEPAPEDVEIDESMYNGQPQYMAPPSQPPMSAQGPMPPMAIPSHSYASQ TFTSTNSSHMYNGTVPSQSAMQQPTSQNPMPQMVAPSVGQPQPNIQGNIAPNIQGNVAPPQNLQNTVTSAQQNFNTNYNG PPLGVNQQFYQPPPQQQPLL |
|