Gene
| Gene Model ID | pfu_aug1.0_11517.1_39192 |
|---|---|
| Locus | scaffold11517.1 : 31789 ... 39305 : - |
| To GenomeBrowser | scaffold11517.1:31789..39305 |
| Genes list of scaffold | scaffold11517.1 |
| Synonym | pfu_aug2.0_98.1_26833 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11517.1_39192.t1 | 1 | 1 | Arf | 6 | 129 | 7.4e-08 | 31.8 | 8.9e-11 | 8.8e-08 | 31.5 |
| pfu_aug1.0_11517.1_39192.t1 | 1 | 1 | Miro | 7 | 120 | 2.6e-18 | 66.6 | 3.7e-21 | 3.6e-18 | 66.1 |
| pfu_aug1.0_11517.1_39192.t1 | 1 | 1 | Ras | 8 | 162 | 5.8e-32 | 110.3 | 7.3e-35 | 7.2e-32 | 110.0 |
| pfu_aug1.0_11517.1_39192.t1 | 1 | 1 | MMR_HSR1 | 8 | 112 | 1.8e-08 | 34.3 | 2.5e-11 | 2.5e-08 | 33.8 |
| pfu_aug1.0_11517.1_39192.t1 | 1 | 1 | GTP_EFTU | 34 | 145 | 4.9e-10 | 39.1 | 2.0e-11 | 2.0e-08 | 33.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11517.1_39192.t1 | gi|328719067|ref|XP_001944566.2| | PREDICTED: GTP-binding protein Di-Ras1-like [Acyrthosiphon pisum] | 5.0e-23 |
Transcript
| Transcript ID | pfu_aug1.0_11517.1_39192.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11517.1_39192.t1 atgtgtcgcgttgcgtcaagactcgccgttcttggtgcatctaaggtaggaaaaacatccttgatcaaacagctcttaaa caaaaaagtggaggacaaatatgacgaaactatagaggacttgtacaagtatacctccacgaaggatcctgaccttcaag tcgacattttagacacctcgggttctgcagaatatcagtcattccgtaggcggaccatgaagaattacgactgtttcctg ctggtgttctcgttagaggatgaggcttctttccaggagatgaggaaaatcagagaccagcttatcgccattaggaaaaa aagtactcctcagattttggtagtcggcaacaaatgtgaccttccatggcggtttatgcccaaagagtccatcgaatcag cagtgaaagaacttggtcacgagtatatggagtgctcagcaaggtgctatgacgacacgaaaattatatttgagagaatc atagacttgagcgacactgatgacgtcttcgctggacaggcgggctatttaggaggggtacatgatggctctatattcat tagaaggatacaaaatgttaacggtgtaccgtctgtagaatgggtacgtctgtactag |
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Protein
| Protein ID | pfu_aug1.0_11517.1_39192.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11517.1_39192.t1 MCRVASRLAVLGASKVGKTSLIKQLLNKKVEDKYDETIEDLYKYTSTKDPDLQVDILDTSGSAEYQSFRRRTMKNYDCFL LVFSLEDEASFQEMRKIRDQLIAIRKKSTPQILVVGNKCDLPWRFMPKESIESAVKELGHEYMECSARCYDDTKIIFERI IDLSDTDDVFAGQAGYLGGVHDGSIFIRRIQNVNGVPSVEWVRLY |
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