Gene
| Gene Model ID | pfu_aug1.0_11534.1_53712 |
|---|---|
| Locus | scaffold11534.1 : 2424 ... 7915 : - |
| To GenomeBrowser | scaffold11534.1:2424..7915 |
| Genes list of scaffold | scaffold11534.1 |
| Synonym | pfu_aug2.0_120.1_00268 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11534.1_53712.t1 | 1 | 1 | Porin_3 | 8 | 176 | 2.90069e-43 | 148.1 | 0.0 | 3.50325e-43 | 147.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 2 |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_11534.1_53712.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11534.1_53712.t1 atggctctcggcgacttcccccgcaagaagagtggaaagatcaagacgtcgtacaagatggattatgtaaatctgggatg tgatttagactttgactttgctggaccaacagtacatggagcagctgtgttaggatacaatggctggttaggaggatacc aaatgtcgtatgatacgtccaaatcaaagctcaccaaaaacaactttgcatttggatatgaggcaggagacttcacaatt cacacaaatgttaacgatggctcagaatttgctgggtcagtataccataaagtaaacaaagacttggaagctggtgtcaa tctgtcctggtcatcaggtaacaactccaccatgctcggtctcggtgccaagtataagctcgataaggattcatctcttg tagcaaaggttaataatagcagtcagataggacttggatacaccaccaaactgagagatggcgtgaagctaacagtgtca tccctggtagagggcaagaatctgaactctggaggacacaaagtcggactcggcgtggagttcgaggcgtag |
|
Protein
| Protein ID | pfu_aug1.0_11534.1_53712.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11534.1_53712.t1 MALGDFPRKKSGKIKTSYKMDYVNLGCDLDFDFAGPTVHGAAVLGYNGWLGGYQMSYDTSKSKLTKNNFAFGYEAGDFTI HTNVNDGSEFAGSVYHKVNKDLEAGVNLSWSSGNNSTMLGLGAKYKLDKDSSLVAKVNNSSQIGLGYTTKLRDGVKLTVS SLVEGKNLNSGGHKVGLGVEFEA |
|