Gene
| Gene Model ID | pfu_aug1.0_11560.1_24917 |
|---|---|
| Locus | scaffold11560.1 : 12673 ... 23743 : - |
| To GenomeBrowser | scaffold11560.1:12673..23743 |
| Genes list of scaffold | scaffold11560.1 |
| Synonym | pfu_aug2.0_10.1_00021 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11560.1_24917.t1 | 1 | 1 | Porphobil_deam | 1 | 90 | 3.2e-28 | 98.1 | 2.5e-32 | 3.8e-28 | 97.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11560.1_24917.t1 | gi|301788450|ref|XP_002929639.1| | PREDICTED: porphobilinogen deaminase isoform X2 [Ailuropoda melanoleuca] | 6.0e-27 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_11560.1_24917.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11560.1_24917.t1 gcgtgaaagtccatacgatgtagttgttttacacccgaaatataacagccaaagtttggaaagtctccccaatggcagtg taatagggactagctctttacggaggtctgcacagctgtcagggagatacactcatctgaaatttgaagcaataaaaggc agtctgaacgatcgattccgcaagcttgatgaagatgacagttatgcaggcctgattctggccgaggcaggtcttgtccg tatgggatggcagcacaggatatctgagattaagctctcctatggagcgtttagcactgttagcgacaaatgcaaaatag aatccatcttccagaagtgtgacgccatggaaaactcatatacgattaagttgtccttcgtgtttctatga |
|
Protein
| Protein ID | pfu_aug1.0_11560.1_24917.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11560.1_24917.t1 RESPYDVVVLHPKYNSQSLESLPNGSVIGTSSLRRSAQLSGRYTHLKFEAIKGSLNDRFRKLDEDDSYAGLILAEAGLVR MGWQHRISEIKLSYGAFSTVSDKCKIESIFQKCDAMENSYTIKLSFVFL |
|