Gene
| Gene Model ID | pfu_aug1.0_11582.1_46397 |
|---|---|
| Locus | scaffold11582.1 : 434 ... 16436 : - |
| To GenomeBrowser | scaffold11582.1:434..16436 |
| Genes list of scaffold | scaffold11582.1 |
| Synonym | pfu_aug2.0_1866.1_21832 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11582.1_46397.t1 | 1 | 1 | Glyco_hydro_20b | 15 | 84 | 1.7e-12 | 47.9 | 1.1e-15 | 3.3e-12 | 47.0 |
| pfu_aug1.0_11582.1_46397.t1 | 2 | 1 | Glyco_hydro_20 | 87 | 148 | 0.0 | 256.8 | 1.6e-27 | 4.7e-24 | 85.1 |
| pfu_aug1.0_11582.1_46397.t1 | 2 | 2 | Glyco_hydro_20 | 160 | 430 | 0.0 | 256.8 | 0.0 | 0.0 | 169.7 |
| pfu_aug1.0_11582.1_46397.t1 | 2 | 1 | CHB_HEX | 575 | 731 | 3.0e-20 | 72.3 | 1.2e-21 | 3.4e-18 | 65.6 |
| pfu_aug1.0_11582.1_46397.t1 | 2 | 2 | CHB_HEX | 747 | 799 | 3.0e-20 | 72.3 | 0.0092 | 27.0 | 4.1 |
Transcript
| Transcript ID | pfu_aug1.0_11582.1_46397.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11582.1_46397.t1 gcaaattgaatatcacatttgagatgtcctcagatacaagtgttccggcgaccaagaacgctatcgttctttctctgggc gccatgaacactgacaatgaagatggatatgttctccaggtggactcttccagtgagaccattactatcacaggaaggaa cagtagcggagtgttctacggaatgcagtctttactcagcctcctcagcggagggacgggtatgcaggtgcccgccgtca gcattgtggacgagcctcgtttccagtacaggggaatgtgtgtggacgtagccaggaatttccaggaaaagtccaccatt ttgaagttgttagatgctatggccatgtataagatggacaggttacatctacgtctggctgatgacgaaggatggcgact tgagataccagacctaccggaacttacagaggtgatgtgtaaaaccaaattatttactgacaacttattatgactggtgg atcccaacgacacgtctgtgtaccagtctgtgcagatattcaacgacaacgccattaatccatgtattgaatctacctat aaattctttgaaaaagttatttctgagatcgtgaagatgcagccttcggtaaagatcttccatttcggcggtgatgaggt cccgagtggagcttgggtaaactcctcaagatgtgaagccgtggccgctgctgatccttactacaaagaccccaagcatc tgaaggaatacttcactcgacggttgtcaaatatcacaaatgagctgggacttaatatggctggatgggaagacggtttg atgaatgaggatggcagaccttataataggacgttactggacaacaccaacgtgtatggttatgcttggcagaacgtgtg ggaatgggggaatgccagacgggcgtatgatcttgccaacaaagattacaaggcaagttttttgtttgttgtgatgtcac atgccacacatttgtactttgaccatccgtatgaaccagatccttttgagcggggactgtattgggcgcccagattcaca gactcgtacaagacattcaggtttatgccggacagtctgtacgagaatattgacgttaggaggtcggggataccaattag caggcaccaggtctgtaaggagaacgacagggagtgtcctcctcttatgcatgcagaaaacattgtaggaatacaaggac agctattcagtgagacaatactcacggaagagtattttgactacatgatttttccgagaatattggctctggctgagaga tcgtggcacaaagccccatgggaaagcacaacggataaggcagtgcgcatgtcacaaatggacgaagactggaaatactt taccaatactgtcggtcataaagaactacaaagactgaccaaacttggaatacattatcgagtggctccacctggtgcca tgatagaagacaatattgtccgagctaaaacagaatttccaggtttagatgttcagtacagtgatgatgatggtcgaaca tggacagatctacctcatgactggcattatacaccagggaagactattcacctcagagctcttgaagggggttattttac actagacttgtgcattcttcgagacctctgggtaatcggaaaagtgtcagacgataaaactcgatacagcagaccggtca agtttgaagcagaagaaaggatccacataccgtaccagtctgagatcgactcgctggccgatcacctggacacaacattt gaggttgttgataaccttgtgaatgatgcaaagaacttcagctgtcgttatactttcaagaacaccggctcaagcaccgt cacatatggcaactggagcgtattctttcacaatatcagactgattcaagccgacgactttccataccctgatggtgtgc ccatggaaaattgtcatatgaggatattccatgttggaggaagtttgtataaattctctcccatgaaaagcttctcactt ggacctatggagaccgcctcttgtcttgtgttcgccaagtactggcaagttgctcgaacagacaccatgcctaactggta tataagtgcagaaggaatggggcccactgtcgtcaaaactacaaaaggaaacagtttatcctttgttaaaccatttgtca gacaaggacaggtacagagatatccggaagatagatgttctgattacaaatctgcaaacgtgaaagtaaggcaatatcga tctgtggtagataattttgctacgaataaaaaaacgaatttcacgaaacttcacaggaagcaagtactcaatgccctcta ccaagtttgtgtttttcgagccgatcgaaaatccaagagtgccgccacaggctctgattggctgacatatttcgacttct cctctgaaaccgtttcagagaatttcttgatatttcacaggaagcaaatactcaatgccctctaccaagtttgtgttttt cgagctgatgggaaatccaagatggctgacgcattttcgacttctcctctgaaaccgctgcacagaatttcatga |
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Protein
| Protein ID | pfu_aug1.0_11582.1_46397.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11582.1_46397.t1 KLNITFEMSSDTSVPATKNAIVLSLGAMNTDNEDGYVLQVDSSSETITITGRNSSGVFYGMQSLLSLLSGGTGMQVPAVS IVDEPRFQYRGMCVDVARNFQEKSTILKLLDAMAMYKMDRLHLRLADDEGWRLEIPDLPELTEVMCKTKLFTDNLLXLVD PNDTSVYQSVQIFNDNAINPCIESTYKFFEKVISEIVKMQPSVKIFHFGGDEVPSGAWVNSSRCEAVAAADPYYKDPKHL KEYFTRRLSNITNELGLNMAGWEDGLMNEDGRPYNRTLLDNTNVYGYAWQNVWEWGNARRAYDLANKDYKASFLFVVMSH ATHLYFDHPYEPDPFERGLYWAPRFTDSYKTFRFMPDSLYENIDVRRSGIPISRHQVCKENDRECPPLMHAENIVGIQGQ LFSETILTEEYFDYMIFPRILALAERSWHKAPWESTTDKAVRMSQMDEDWKYFTNTVGHKELQRLTKLGIHYRVAPPGAM IEDNIVRAKTEFPGLDVQYSDDDGRTWTDLPHDWHYTPGKTIHLRALEGGYFTLDLCILRDLWVIGKVSDDKTRYSRPVK FEAEERIHIPYQSEIDSLADHLDTTFEVVDNLVNDAKNFSCRYTFKNTGSSTVTYGNWSVFFHNIRLIQADDFPYPDGVP MENCHMRIFHVGGSLYKFSPMKSFSLGPMETASCLVFAKYWQVARTDTMPNWYISAEGMGPTVVKTTKGNSLSFVKPFVR QGQVQRYPEDRCSDYKSANVKVRQYRSVVDNFATNKKTNFTKLHRKQVLNALYQVCVFRADRKSKSAATGSDWLTYFDFS SETVSENFLIFHRKQILNALYQVCVFRADGKSKMADAFSTSPLKPLHRIS |
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