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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1160.1_36842
Locus scaffold1160.1 : 1 ... 8981 : +
To GenomeBrowser scaffold1160.1:1..8981
Genes list of scaffold scaffold1160.1
Synonym pfu_aug2.0_204.1_13796

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_1160.1_36842.t1 1 1 PEP_mutase 25 124 8.6e-26 90.6 1.5e-29 1.1e-25 90.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_1160.1_36842.t1 gi|41713045|sp|P56839.3|PEPM_MYTED Phosphoenolpyruvate phosphomutase [Mytilus edulis] 0.0

Transcript
Transcript IDpfu_aug1.0_1160.1_36842.t1
Definition-
>pfu_aug1.0_1160.1_36842.t1
ctacaagtctggcatgtgctgttaaacaaagaaatgttggaagttctactacagagaagaaaacaacaaagctgaagaaa
atgctcacctctccaaatttagagtttataatggaagctcataatggactgagtgctagaatggtggaagaagcaggatt
taaaggtgtatggggaagtggcctatctatctcagcccagctaggagtgcgggatagtaacgaggcttcgtggactcagg
ttttagacgtcatggaatttatgagtgatgctacaacagtgccgatactgctggatgcagacacagggtacggaaacttt
aacaacgcaagacgactggtcaggaagctagaggacaggggaattgccggacttttaaaatctaaagcttacagaattga
gatttaccattatggaatgtctagattaagtaatgaagctgaaccacctgtctctctgagctttagttatatttaa

Protein
Protein IDpfu_aug1.0_1160.1_36842.t1
Definition-
>pfu_aug1.0_1160.1_36842.t1
TSLACAVKQRNVGSSTTEKKTTKLKKMLTSPNLEFIMEAHNGLSARMVEEAGFKGVWGSGLSISAQLGVRDSNEASWTQV
LDVMEFMSDATTVPILLDADTGYGNFNNARRLVRKLEDRGIAGLLKSKAYRIEIYHYGMSRLSNEAEPPVSLSFSYI

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