Gene
| Gene Model ID | pfu_aug1.0_1160.1_36846 |
|---|---|
| Locus | scaffold1160.1 : 75256 ... 78676 : + |
| To GenomeBrowser | scaffold1160.1:75256..78676 |
| Genes list of scaffold | scaffold1160.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1160.1_36846.t1 | 3 | 1 | Clathrin_propel | 2 | 31 | 7.5e-19 | 66.6 | 4.9e-06 | 0.024 | 14.8 |
| pfu_aug1.0_1160.1_36846.t1 | 3 | 2 | Clathrin_propel | 53 | 85 | 7.5e-19 | 66.6 | 4.7e-08 | 0.00023 | 21.2 |
| pfu_aug1.0_1160.1_36846.t1 | 3 | 3 | Clathrin_propel | 93 | 127 | 7.5e-19 | 66.6 | 1.2e-09 | 5.7e-06 | 26.2 |
| pfu_aug1.0_1160.1_36846.t1 | 1 | 1 | Clathrin-link | 128 | 151 | 4.7e-12 | 44.6 | 2.1e-15 | 1.0e-11 | 43.5 |
| pfu_aug1.0_1160.1_36846.t1 | 1 | 1 | Clathrin_H_link | 153 | 218 | 8.9e-34 | 115.2 | 3.6e-37 | 1.8e-33 | 114.2 |
Transcript
| Transcript ID | pfu_aug1.0_1160.1_36846.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1160.1_36846.t1 atgaaactagatggaaacgctaacccatcaactctcttcacttttgctgttagaggtgctcagggaggcaaactacatgt gatagaggttggtcaagcaccacaaggaaatactccgttcgcaaagaaaaacgtcgatgttttcttccctcctgaggcac agaatgacttccctgtagccatgcaggtcagtccaaaacacaatgtggtgtttatgattacaaaatacggctatctacac atgtacgacctagaaacaggcacgtgtatatacatgaacaggataagtggcgacaccatatttgtaactgcccctcatga ggctacttctggcatcatcggtgtaaatcgtaaaggacaggtattgtctgtgagtgtagaggaagacaacatagtacaat acatcaccaacaacctgcaaaatcctgacctagccctaaaaatagcctctcgtgccaacctacccggggccgaggacctc tttgtcaggaaatttaacaacttgtttcagagtggaaactacacagaggcagccaaagtagctgctagtgcacctaaggg tattctgagaaccccacagaccatacagagattccaacagttaccgtcagcccagggtcagacctctccattactacagt actttggtatcctcctggacaaaggcagtctgaacaagtacgagtcgttagaactgtgtcgtcctgtgttacagtctggt aggaaacaactactggagaaatggctcaaagaagataagctccaagccagtgaggagttaggagacctagtgaaagcagt agatccacaattagctctgtctgtataccttagagcccaagtaccacagaaagtcattcagtgttttgcggagacgggac agtttgacaagatcgttctatacgccaaaaaaactggctacacgcctgattacatcttcctccttaggagccttatgaga atgaacccagaacaaggaacgtcgttcgcccagaaacttgttcaggacgatgaaccactggcagatctcaaccaggtaaa attaatgttttacatttga |
|
Protein
| Protein ID | pfu_aug1.0_1160.1_36846.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1160.1_36846.t1 MKLDGNANPSTLFTFAVRGAQGGKLHVIEVGQAPQGNTPFAKKNVDVFFPPEAQNDFPVAMQVSPKHNVVFMITKYGYLH MYDLETGTCIYMNRISGDTIFVTAPHEATSGIIGVNRKGQVLSVSVEEDNIVQYITNNLQNPDLALKIASRANLPGAEDL FVRKFNNLFQSGNYTEAAKVAASAPKGILRTPQTIQRFQQLPSAQGQTSPLLQYFGILLDKGSLNKYESLELCRPVLQSG RKQLLEKWLKEDKLQASEELGDLVKAVDPQLALSVYLRAQVPQKVIQCFAETGQFDKIVLYAKKTGYTPDYIFLLRSLMR MNPEQGTSFAQKLVQDDEPLADLNQVKLMFYI |
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