Gene
| Gene Model ID | pfu_aug1.0_11638.1_68374 |
|---|---|
| Locus | scaffold11638.1 : 296 ... 6566 : + |
| To GenomeBrowser | scaffold11638.1:296..6566 |
| Genes list of scaffold | scaffold11638.1 |
| Synonym | pfu_aug2.0_2245.1_18743 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11638.1_68374.t1 | 2 | 1 | ANF_receptor | 68 | 92 | 2.9e-32 | 111.8 | 0.11 | 790.0 | -1.5 |
| pfu_aug1.0_11638.1_68374.t1 | 3 | 1 | Peripla_BP_6 | 69 | 88 | 1.7e-07 | 30.9 | 0.15 | 1100.0 | -1.4 |
| pfu_aug1.0_11638.1_68374.t1 | 2 | 2 | ANF_receptor | 92 | 387 | 2.9e-32 | 111.8 | 8.2e-36 | 6.1e-32 | 110.7 |
| pfu_aug1.0_11638.1_68374.t1 | 3 | 2 | Peripla_BP_6 | 93 | 242 | 1.7e-07 | 30.9 | 4.7e-11 | 3.5e-07 | 29.8 |
| pfu_aug1.0_11638.1_68374.t1 | 3 | 3 | Peripla_BP_6 | 345 | 388 | 1.7e-07 | 30.9 | 0.3 | 2200.0 | -2.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11638.1_68374.t1 | gi|260841771|ref|XP_002614084.1| | hypothetical protein BRAFLDRAFT_67330 [Branchiostoma floridae] | 9.0e-30 |
Transcript
| Transcript ID | pfu_aug1.0_11638.1_68374.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11638.1_68374.t1 atgtggtgttctgtcctagtgttgagcttggcactagcagcgtgtcatgctcagactctccaacgagagacgtgcgatgc tcggaggttcgaagtggatgtgggtgtgtcatcatcccaagctctcattggagggctgtttgaggtcaggaaccccctca tgggaggttacgcctgtggtcaaccacataaagagctgatacaagtttatgaagctgcaagatgggctttggagagagtt aatactcagggcataataccaggaataactatgggtctccttggccctctgtctagctggaccacccaacctgtggcaga gatggcctcctcatttcctgcatccgtcatctcccccagggccgtgtcaccatctttaagtgacaagacaaagtaccctt actttctacgcacaggtccggcatggcctgcacaaacaagagcaatagccgcagttctgaataggctggtatggaagaga gtgattgtggtatacactaccagtgtacatggttcagatgggtttgaccaatttaaacggcaagcatttaaagatggtat ctgtatcacaaaagctattgcggtaccaagtatgggctctgtaagtgatttccaaacccgtgtaaataacttgggtcaat acaacatcaatacggcagtttttattgggtcttacatggaagcagtgaatctgatgcaggcgctaaataatattggatcc gccaacaacgtccaatggatcttacctgatctcaacttgatggaatcttactcggctcctaatgtcagaggcgccctcta tgtaggcccacgtacagtgtccattatggaatttgctaattatttcacacagatcaacgagagatccccacctgctgaga atccatggttttctgattggtatatgaccaattataactgcaaacttccaggagtaagctatcagccatatgtaggcttt gcaaacacatgccccacccttactgcacaacaaaaactctcaaatttccgtcagctcccgtatgcagagaccaccattaa agctgtgtatgcctacgccaaagctctgcgtcaggcccatcaacaaaggtgcggtggaataccgggcgtctgctcatcat tacagacaatgaccccagaggagttccatgctattctaaagaatatcgactttactgtgagtatatattctatgtaa |
|
Protein
| Protein ID | pfu_aug1.0_11638.1_68374.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11638.1_68374.t1 MWCSVLVLSLALAACHAQTLQRETCDARRFEVDVGVSSSQALIGGLFEVRNPLMGGYACGQPHKELIQVYEAARWALERV NTQGIIPGITMGLLGPLSSWTTQPVAEMASSFPASVISPRAVSPSLSDKTKYPYFLRTGPAWPAQTRAIAAVLNRLVWKR VIVVYTTSVHGSDGFDQFKRQAFKDGICITKAIAVPSMGSVSDFQTRVNNLGQYNINTAVFIGSYMEAVNLMQALNNIGS ANNVQWILPDLNLMESYSAPNVRGALYVGPRTVSIMEFANYFTQINERSPPAENPWFSDWYMTNYNCKLPGVSYQPYVGF ANTCPTLTAQQKLSNFRQLPYAETTIKAVYAYAKALRQAHQQRCGGIPGVCSSLQTMTPEEFHAILKNIDFTVSIYSM |
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