Gene
| Gene Model ID | pfu_aug1.0_1167.1_43914 |
|---|---|
| Locus | scaffold1167.1 : 13211 ... 19825 : - |
| To GenomeBrowser | scaffold1167.1:13211..19825 |
| Genes list of scaffold | scaffold1167.1 |
| Synonym | pfu_aug2.0_97.1_23431 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1167.1_43914.t1 | 1 | 1 | DUF1143 | 2 | 115 | 7.9e-33 | 113.5 | 6.3e-37 | 9.4e-33 | 113.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1167.1_43914.t1 | gi|72011693|ref|XP_785712.1| | PREDICTED: UPF0686 protein C11orf1 homolog [Strongylocentrotus purpuratus] | 1.99993e-41 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1167.1_43914.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1167.1_43914.t1 atggtgagggccagcggtcttgctgaggtgtggacacacagcacagaggcggccaagttcgaccaattcgggtggaggtg cacaaacaaagaaacatcatactcaaacgatacgctgataggtaattggaatgagcagagatttgatatagagaaagcca aaatacctcaacgacttcctggtcagcatgagcattattttgagacatcatatggcgttggttataacaaagtaccttat gaggtacctaaggaattacaacatctaaaaggccgccattcccacgccttcccaggacatcagccagagctagacagtat gaaacttaaacagacctacaacagctgggaaacgaccacacgggccggctacgtggatcctagaattagaaaggaaccag tacagaaccctgtgtaa |
|
Protein
| Protein ID | pfu_aug1.0_1167.1_43914.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1167.1_43914.t1 MVRASGLAEVWTHSTEAAKFDQFGWRCTNKETSYSNDTLIGNWNEQRFDIEKAKIPQRLPGQHEHYFETSYGVGYNKVPY EVPKELQHLKGRHSHAFPGHQPELDSMKLKQTYNSWETTTRAGYVDPRIRKEPVQNPV |
|