Gene
| Gene Model ID | pfu_aug1.0_1169.1_36858 |
|---|---|
| Locus | scaffold1169.1 : 2946 ... 14585 : + |
| To GenomeBrowser | scaffold1169.1:2946..14585 |
| Genes list of scaffold | scaffold1169.1 |
| Synonym | pfu_aug2.0_753.1_11161 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1169.1_36858.t1 | 4 | 1 | CENP-F_leu_zip | 33 | 81 | 3.5e-06 | 26.9 | 0.013 | 15.0 | 5.4 |
| pfu_aug1.0_1169.1_36858.t1 | 4 | 2 | CENP-F_leu_zip | 62 | 190 | 3.5e-06 | 26.9 | 0.00049 | 0.56 | 10.0 |
| pfu_aug1.0_1169.1_36858.t1 | 4 | 3 | CENP-F_leu_zip | 187 | 268 | 3.5e-06 | 26.9 | 3.1e-09 | 3.5e-06 | 26.9 |
| pfu_aug1.0_1169.1_36858.t1 | 4 | 4 | CENP-F_leu_zip | 287 | 371 | 3.5e-06 | 26.9 | 0.35 | 400.0 | 0.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1169.1_36858.t1 | gi|291231136|ref|XP_002735523.1| | PREDICTED: ankycorbin-like [Saccoglossus kowalevskii] | 1.0e-16 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1169.1_36858.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1169.1_36858.t1 atgagattgaaaaacagacaactgaacttcagcaaagtcagccccctttcgtctcctgaaaaggtcaagttagatgatca aactgaagatgacatacaggaacatgaagaagagtcggcaaatggtgaaggcaaagaattacgaaaggagaacttcatcc taaaagaagataacgaaacactgaaatcagacctagacaatctacgagatacatacgataaacttgttcaggctggcgat aacttgcaggacatgtacgatcagcttttagtacaaaaagatcaacaagacgaggtcattgaaaaactagtgcttgaaaa agatgaacttgtgaaagaaaatgaatttctattaactgatggaaacgccatgcatgatgatctagaaaaactagtgcagg aattagaaaaattacaagaaaaatacaaaacgttacaagaggaaaaggagagcactgagagaaaattaagcgccatgagt atgtcaggaaaggctagtgaactagctaaggtgatggaagaaaaagacaagtataaaggagagtgtgaaagcctggaagc cgaaaatcagagaataaaacacgaccatgacgtagtgttggaggaagtacagaatctacaagaacagtgtggtttgtatc aaggtgagagggaacaaatgcaggccgactttgataatgctcaggaggagtttgagcagctcactgtacagtatgaggct cttcagcaggattactctcaactcgagaacgattattcggagttactacaggacaaggagaaactggagcaagaattcct ggatgtacagacagccagtgtacacataggacatcgtaatcctgaccctgaaatggacgaagagaaggaacaacttcacc aagaaaatgaaatactgacgtacgaaaaagagcagctagaaatgaccattcaggaactctcaaagagtaatgctctactg gaggaggaaatcggaaagaagcaacatgatctctcaaagacacaagaaaagttaaaaagggaattatcaatacgggccgt ccagtcaacggactcgaccacagacaaagacaaacagatcaaatcgctacagatgcaggtggcaagattacagcaacaat tagccgagacggatagacgacataaagatgttgtcaacacatacaggacacatcttcttagtgctgtacagggacacatg gacgctgacgttcaacaagctctgtacaatattatagaactacgcagcatggaggaatactgctga |
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Protein
| Protein ID | pfu_aug1.0_1169.1_36858.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1169.1_36858.t1 MRLKNRQLNFSKVSPLSSPEKVKLDDQTEDDIQEHEEESANGEGKELRKENFILKEDNETLKSDLDNLRDTYDKLVQAGD NLQDMYDQLLVQKDQQDEVIEKLVLEKDELVKENEFLLTDGNAMHDDLEKLVQELEKLQEKYKTLQEEKESTERKLSAMS MSGKASELAKVMEEKDKYKGECESLEAENQRIKHDHDVVLEEVQNLQEQCGLYQGEREQMQADFDNAQEEFEQLTVQYEA LQQDYSQLENDYSELLQDKEKLEQEFLDVQTASVHIGHRNPDPEMDEEKEQLHQENEILTYEKEQLEMTIQELSKSNALL EEEIGKKQHDLSKTQEKLKRELSIRAVQSTDSTTDKDKQIKSLQMQVARLQQQLAETDRRHKDVVNTYRTHLLSAVQGHM DADVQQALYNIIELRSMEEYC |
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