Gene
| Gene Model ID | pfu_aug1.0_1169.1_36859 |
|---|---|
| Locus | scaffold1169.1 : 52945 ... 55585 : - |
| To GenomeBrowser | scaffold1169.1:52945..55585 |
| Genes list of scaffold | scaffold1169.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1169.1_36859.t1 | 1 | 1 | RRM_1 | 117 | 155 | 3.3e-07 | 29.8 | 8.3e-11 | 6.2e-07 | 28.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1169.1_36859.t1 | gi|321460482|gb|EFX71524.1| | hypothetical protein DAPPUDRAFT_227924 [Daphnia pulex] | 2.0e-18 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1169.1_36859.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1169.1_36859.t1 atgtacgatagatcaatggatgattttagagacgtagaaatttacagggaaaaacccgccaaaaggcatcgcgaaaggaa atatagcgattattacgaatcatacgaaaactcgtacacgtacgaatcgtactacaaaaggacgtactatgattcggacc acgaaaggacgtactgtgactcggacacagagagagcgtactataactcggatacggattgctccgatacgcgtagcacc tgttcagataggtactactatgaacgtctgtccgtggaatcgtacgattacagaactatgaatggacaagtccagaagac ggagccagatccagatgccatcaaaatgttcgtaggacagattccacggtctatggacgagaatgacttacggaaaatgt ttgaagaatttggttcagtgtttcagttgaacgtactccgcgacaaagcatcggggcagagcaaggtccgtttgtcattc catttcagttcttatgatttcttttcaccgactgatgactag |
|
Protein
| Protein ID | pfu_aug1.0_1169.1_36859.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1169.1_36859.t1 MYDRSMDDFRDVEIYREKPAKRHRERKYSDYYESYENSYTYESYYKRTYYDSDHERTYCDSDTERAYYNSDTDCSDTRST CSDRYYYERLSVESYDYRTMNGQVQKTEPDPDAIKMFVGQIPRSMDENDLRKMFEEFGSVFQLNVLRDKASGQSKVRLSF HFSSYDFFSPTDD |
|