Gene
| Gene Model ID | pfu_aug1.0_11707.1_39212 |
|---|---|
| Locus | scaffold11707.1 : 1 ... 30419 : + |
| To GenomeBrowser | scaffold11707.1:1..30419 |
| Genes list of scaffold | scaffold11707.1 |
| Synonym | pfu_aug2.0_1491.1_05084 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11707.1_39212.t1 | 1 | 1 | Anticodon_1 | 309 | 405 | 1.6e-15 | 57.1 | 5.7e-19 | 4.2e-15 | 55.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11707.1_39212.t1 | gi|291229909|ref|XP_002734913.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_11707.1_39212.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11707.1_39212.t1 tcaacctaaatacatggtaacatttccctacccttacatgaatggacgacttcatctcggtcacacgttttctttgtcaa agtgcgaggttgactggcgtaggacttttattaccaccgaggccaatccttattacgactcatttgttcgatggcagttc ataagactgaaagagaaaaataaagtcaagtttggaaaaagatacacaatatactcaccaaaagatgggcagccatgtat ggaccatgacaggagtacaggagagggtgtgggtccacaggagtacacccttatcaaactgaaggttcagaaaccctacc cacctaaactcaggtatctagactatggtgagccagagtggaagaagatggcattagaagccttgtcgaagatagagacg tactctgatgaagtcaggaagaactttgaggctactttagactggctacacgaacatgcctgctctagatcttatggtct tggaaccaagctgccatgggatcctcagtacttgatagagtcactgtctgactccacaatatacaatgcttactatacgg tagcacatctgctgcagggaggagtgtttgatggaagtgggaaaagtccagctaacatcagacctgagcagatgacccct gagatatgggactacatattctacaaggacaagcccctccctaagacggatatacccaaggccactctggacaagatgag ggcggagttcctgtactggtacccagtagatctgagagtgtcgggcaaagacctggtacccaaccatctaacatactata tatataaccactgtgctatgtgggacaaggacaggtcaaggtggcctacaggcattagggccaatggacatttacagctt aactctgagaaatacatgaacatcataagctcttgtatcaattttagtgagataagcaaagcaatcattgacacacagga gaattacgagaagatgttgtataaagaggcaatgaaaacaggattttatgaactccaggcatccagggacaagtatcgtg aggttgagatgtcggggatgcatcgtgatctgatgatccagtttatcgagacccagacattgttattgagtcctatctgt ccacatatctgtgagcacatctggggactactcggacacgacaagagcatcatgcatgcaaaatggccgactcctggacc ggtggataacaacagattacagatatctcagtatgtaatggacggagctcacgactttcgtattcgtctcaagcagctaa tgacccccggaaagggaaagaaaatgaaacttgacaaagctacgcatggaactatctgggttgccaagagttatcctcct tggcagaatacagttcttaccaccttgaaaagattgtatgaggagaataaaggatttcctgatatgaaggtcattgctgc agagttcaaggacaaaccagaactaaagaagtatatgaagaaattaatgccatttgtacagctagccaaggataacttcg ccacacacggaatgaaggctctgaagttgacgtctgattttgatgaaaaagtagaaatggagaggtttaaggactacctg acatcaacattggatataaaaggtcattgtggacttgtgctagaaaaacttgtggacggtatagaagattccaagcaggt gaagctgatgatgtttgatgacgcggcaagtgcccgtatgatccccgatctgaacaatctagacagagggaaaacgcacg tgccggacggcgccatcttcaacttgaatctaaacgacaagactgtttccatgaaaactaacggcaaatctgtggacttt ggtgcaaaactcgtctatgtagtgacgtcggtacagggatga |
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Protein
| Protein ID | pfu_aug1.0_11707.1_39212.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11707.1_39212.t1 QPKYMVTFPYPYMNGRLHLGHTFSLSKCEVDWRRTFITTEANPYYDSFVRWQFIRLKEKNKVKFGKRYTIYSPKDGQPCM DHDRSTGEGVGPQEYTLIKLKVQKPYPPKLRYLDYGEPEWKKMALEALSKIETYSDEVRKNFEATLDWLHEHACSRSYGL GTKLPWDPQYLIESLSDSTIYNAYYTVAHLLQGGVFDGSGKSPANIRPEQMTPEIWDYIFYKDKPLPKTDIPKATLDKMR AEFLYWYPVDLRVSGKDLVPNHLTYYIYNHCAMWDKDRSRWPTGIRANGHLQLNSEKYMNIISSCINFSEISKAIIDTQE NYEKMLYKEAMKTGFYELQASRDKYREVEMSGMHRDLMIQFIETQTLLLSPICPHICEHIWGLLGHDKSIMHAKWPTPGP VDNNRLQISQYVMDGAHDFRIRLKQLMTPGKGKKMKLDKATHGTIWVAKSYPPWQNTVLTTLKRLYEENKGFPDMKVIAA EFKDKPELKKYMKKLMPFVQLAKDNFATHGMKALKLTSDFDEKVEMERFKDYLTSTLDIKGHCGLVLEKLVDGIEDSKQV KLMMFDDAASARMIPDLNNLDRGKTHVPDGAIFNLNLNDKTVSMKTNGKSVDFGAKLVYVVTSVQG |
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