Gene
| Gene Model ID | pfu_aug1.0_11726.1_39222 |
|---|---|
| Locus | scaffold11726.1 : 5946 ... 17522 : + |
| To GenomeBrowser | scaffold11726.1:5946..17522 |
| Genes list of scaffold | scaffold11726.1 |
| Synonym | pfu_aug2.0_1451.1_05060 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11726.1_39222.t1 | 1 | 1 | zf-C3HC4_2 | 271 | 311 | 6.1e-06 | 26.1 | 6.0e-09 | 1.1e-05 | 25.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_11726.1_39222.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11726.1_39222.t1 atgtaccttgaagacgatagacgaaacacagtatttccgacggatgatggcatgtttccttttgatgagatggcagactg gtcctcgtggcaggtgcatggcgacagcacagtttctgtagcaagaccgcttttccaatcgccaaacagtgcatctcaga gtggtagtgggtattcattgcctccctcgcgtccagcagcaacaccaactccattccttccaccagcagcaagacggtcg cgagtcattagacgatcacttatccttggcgaatttgaccctgagaccctccacctagtgcaaaagaagacaacatgcat cttattgaatgtggatgactgcaacgttgatggtgtcatcgataagttcagggagacagagaacttggacgacagcaact tcgttatctgcgatccccgtggccaacaaattcacgacaccgcagcaacaagaggggctgacttctggaagataaacagc aggaagatctatgttgttgaggaatccaatttcaacatgttcatcgagaagaaagaggaaaaagaaagagcaaagaagag aagaatagcaacacagtcaacatcagctgagatagagaccatcgcgcgatctaacaacaacctaatagaagatgtcagag ttgcagttgcgcggacctcagttgacattgaagcaaaggtggaggatgtcgcccgcacactacaaagacaaatcgaaaac tcgacgacaagagttctttatcgtctttcttcttctgttagaccacccgaggtagatccaatcagagaggaaatgaagaa gattctgcggtgcaagatttgccatgacgttgcagatgatgaaattgtcctggcaacatgctgtggccaggttcttgggt gcggtacctgtgcccaggaccattacgcagagaacgaacggtgtcctctctgcaacaatgagaatggtgttaattctctg tgcacccttcgtgggtttgatatagtgaaggacatcttacaggaagttgttttgccaagtgcataa |
|
Protein
| Protein ID | pfu_aug1.0_11726.1_39222.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11726.1_39222.t1 MYLEDDRRNTVFPTDDGMFPFDEMADWSSWQVHGDSTVSVARPLFQSPNSASQSGSGYSLPPSRPAATPTPFLPPAARRS RVIRRSLILGEFDPETLHLVQKKTTCILLNVDDCNVDGVIDKFRETENLDDSNFVICDPRGQQIHDTAATRGADFWKINS RKIYVVEESNFNMFIEKKEEKERAKKRRIATQSTSAEIETIARSNNNLIEDVRVAVARTSVDIEAKVEDVARTLQRQIEN STTRVLYRLSSSVRPPEVDPIREEMKKILRCKICHDVADDEIVLATCCGQVLGCGTCAQDHYAENERCPLCNNENGVNSL CTLRGFDIVKDILQEVVLPSA |
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