Gene
| Gene Model ID | pfu_aug1.0_11732.1_32110 |
|---|---|
| Locus | scaffold11732.1 : 15396 ... 17702 : + |
| To GenomeBrowser | scaffold11732.1:15396..17702 |
| Genes list of scaffold | scaffold11732.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11732.1_32110.t1 | 2 | 1 | zf-C3HC4_3 | 15 | 62 | 1.5e-08 | 34.1 | 1.3e-11 | 1.5e-08 | 34.1 |
| pfu_aug1.0_11732.1_32110.t1 | 1 | 1 | zf-RING_2 | 16 | 61 | 2.7e-08 | 33.5 | 2.4e-11 | 2.7e-08 | 33.5 |
| pfu_aug1.0_11732.1_32110.t1 | 2 | 1 | zf-C3HC4 | 17 | 60 | 1.3e-08 | 34.3 | 1.1e-11 | 1.3e-08 | 34.3 |
| pfu_aug1.0_11732.1_32110.t1 | 2 | 1 | zf-C3HC4_2 | 17 | 60 | 1.2e-07 | 31.5 | 1.1e-10 | 1.3e-07 | 31.5 |
| pfu_aug1.0_11732.1_32110.t1 | 2 | 1 | zf-RING_UBOX | 17 | 58 | 1.4e-07 | 31.1 | 1.2e-10 | 1.4e-07 | 31.1 |
| pfu_aug1.0_11732.1_32110.t1 | 1 | 1 | zf-C3HC4_4 | 17 | 60 | 2.7e-07 | 30.3 | 2.4e-10 | 2.7e-07 | 30.3 |
| pfu_aug1.0_11732.1_32110.t1 | 2 | 2 | zf-C3HC4_3 | 95 | 125 | 1.5e-08 | 34.1 | 0.03 | 34.0 | 4.1 |
| pfu_aug1.0_11732.1_32110.t1 | 2 | 2 | zf-C3HC4 | 97 | 127 | 1.3e-08 | 34.3 | 0.052 | 60.0 | 3.4 |
| pfu_aug1.0_11732.1_32110.t1 | 2 | 2 | zf-C3HC4_2 | 97 | 126 | 1.2e-07 | 31.5 | 0.013 | 15.0 | 5.7 |
| pfu_aug1.0_11732.1_32110.t1 | 2 | 2 | zf-RING_UBOX | 101 | 124 | 1.4e-07 | 31.1 | 0.42 | 480.0 | 0.5 |
Transcript
| Transcript ID | pfu_aug1.0_11732.1_32110.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11732.1_32110.t1 atgatggatgatacaatagatactaatgctgcagaaagatactttacttgtgtcatttgcaagggatattttaagaatcc taggcttttaccttgttcacatgcattttgccgagattgcattaaagaactttacaaacgaagggaaaatacaacaaacg aatgtgcctgtccgatctgcagaggaaattttgttcttgattatagaggagttgacggacttcagcctttcttccaggca caagggattctctcagagcgatgtattgataatgggcaggatgctgtttgtgagcactgccaaaaacggccagttgccgg atgctgcagaacttgccgagaggacatctgcaaaaagtgcatcgagagacatcgtgaatatgatgacttacggaagcacg aaactgtcttatatacaggaaacgaaagactatcagagaaattcgtgtccaaaaactttcataacaggtttatgtacccg ccatctattcgttccactgaggagtacgacaaattaagaaaaatgaaaaatgcattagttgacttgcaatcacagatgga atttcacttcaaaaagctgaaaaacagggcaatcagttttaaggaagagaaagagagatcaaagagtgagatcagatctc acatcagattactcaaatctaaattggatgaagaggaggtaaggttaatggacaaactaaacgatgagtatgaaaatgag cgttccaaattccagcaacaatctgaaagagttaaaggctggacgaaagatgtcaatgacgttcttggacgcattatgtc gaagttgtacgatgagcccgaatctcctgatggtccgacattggaagaactctttcgcacttttgatagggtcgaacgtt ctaaactcaaatttaatcattgttag |
|
Protein
| Protein ID | pfu_aug1.0_11732.1_32110.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11732.1_32110.t1 MMDDTIDTNAAERYFTCVICKGYFKNPRLLPCSHAFCRDCIKELYKRRENTTNECACPICRGNFVLDYRGVDGLQPFFQA QGILSERCIDNGQDAVCEHCQKRPVAGCCRTCREDICKKCIERHREYDDLRKHETVLYTGNERLSEKFVSKNFHNRFMYP PSIRSTEEYDKLRKMKNALVDLQSQMEFHFKKLKNRAISFKEEKERSKSEIRSHIRLLKSKLDEEEVRLMDKLNDEYENE RSKFQQQSERVKGWTKDVNDVLGRIMSKLYDEPESPDGPTLEELFRTFDRVERSKLKFNHC |
|