Gene
| Gene Model ID | pfu_aug1.0_11733.1_60935 |
|---|---|
| Locus | scaffold11733.1 : 2496 ... 11288 : + |
| To GenomeBrowser | scaffold11733.1:2496..11288 |
| Genes list of scaffold | scaffold11733.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11733.1_60935.t1 | 1 | 1 | Acyl-CoA_dh_1 | 48 | 92 | 8.4e-15 | 55.1 | 1.4e-18 | 1.1e-14 | 54.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11733.1_60935.t1 | gi|218749864|ref|NP_001136342.1| | short-chain acyl-CoA dehydrogenase [Nasonia vitripennis] | 2.0e-21 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-Dshape | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_11733.1_60935.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11733.1_60935.t1 atgaaggtaaactgtatattatcaggcagccttcgagacagctatagagtatgcccagaagagagaggctttcggatcac ctatatcaaagatgcaaacagtccaggccatccatacttcatattctattttacgctatttcaggccatccagattctag gtggtatgggttttgtcactgacatgccagcagagagacattacagggacgctagaatcacggaaatatacgagggaacg agtgaaatccaaagactcgttatcgcaggaaatttgctcaaggaatacatgtccagctag |
|
Protein
| Protein ID | pfu_aug1.0_11733.1_60935.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11733.1_60935.t1 MKVNCILSGSLRDSYRVCPEERGFRITYIKDANSPGHPYFIFYFTLFQAIQILGGMGFVTDMPAERHYRDARITEIYEGT SEIQRLVIAGNLLKEYMSS |
|