Gene
| Gene Model ID | pfu_aug1.0_11743.1_53731 |
|---|---|
| Locus | scaffold11743.1 : 8338 ... 50377 : - |
| To GenomeBrowser | scaffold11743.1:8338..50377 |
| Genes list of scaffold | scaffold11743.1 |
| Synonym | pfu_aug2.0_5560.1_02758 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11743.1_53731.t1 | 1 | 1 | DUF4631 | 3 | 135 | 1.7e-11 | 43.1 | 1.1e-14 | 2.8e-11 | 42.4 |
| pfu_aug1.0_11743.1_53731.t1 | 1 | 1 | RVT_1 | 437 | 584 | 1.2e-08 | 34.6 | 2.4e-11 | 5.8e-08 | 32.3 |
| pfu_aug1.0_11743.1_53731.t1 | 1 | 1 | rve | 953 | 1054 | 2.7e-15 | 56.5 | 3.1e-18 | 7.6e-15 | 55.0 |
Transcript
| Transcript ID | pfu_aug1.0_11743.1_53731.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11743.1_53731.t1 atgcaggaccataaggattctacaacgcgtgctatgacggaccttgatgccaggatgaacttcttaaaagcgagaatgaa cgagttcgaggaaaagttggaggcacgagttgcaactgtatatgctgtccaagagaagcagactttgatgaaaaacgaaa tggactccagagtaacggtagaaacagagaaaagggcacaagaaattgcaacattaaaacaagaaatagaagcattaaaa cagaggcgggatccaaaccctgccacacagcaagatatcagcaatgtacaagcaagtctgaggaagatggccgactccat acagacggtaaaaaccgtgcttggtatgaagatccagtcagagcagaaactgcgtggcgatgaagtgcagaaattacaag atgaaatagctattttaagaactgcgctagaaccattggtgaaaaagccattaccccgatctttcatcaagaaccctaat cagcgaaacaatcagggggatgatactcctgacgttaatcgacattcggtagcaaatgcctacagtattgcttacgatcg tagagcgtatccagttgctttagagggtagtctcaaggtaagctctcacatcgaactgtcaagcaataaatcaatggaga cacaccaatatcagacatcctacatcagtcaacatttggcgacacacagcacccacatcgaacggccaagcaataaatca atggagatacaccgatatcagatatcctacatcagtcaacatttggtgacacacagcacccacatcaaacggtcaaatac tggggctacagttaacatcctcgacgagaagacttaccaatcagtaggtacacctagactccagaggaaaaatcgacaaa aactacaaccatatggaggaggacgctcacttcatatccttggaacgtgtaaattaggagtcgaatctaaagagaaattc gaatgtcacaccttctctgtggtcaaggggaaccatggtgctatcttcggtttcgaaacagcaccacaactctatcttgt gaaaatagtgcaacagataaaacctgctacgcttgaagttgagcacaaatatgcacacctatttgaaggtataggaagat acaagaagggcaagatcaagctccacatagatgaaaacataaaacctgttgcacagaggtacagacgaacaccctttcac ttaagatcaaaagttgagaaggagatagaaaaactgataaaggaggatatcatagagaatgtaacacagggccgtcctac gccatgggtctcgcctatcgtaacgccgccaaagaaaaacccggatgaaatccgactctgcgtagacatgcgagaagcaa acaaagccatattgcgagaaagacatgttctaccaacaatcgacgagctaatttatgatctaaacaatgctagcgaattc agcaaactggatctacgagcgggctatcaccaaatggaacttgaggaggaatcaaagcatattacaactttcagtacaca tttgggtctgtacagatataagaggctaaatttcgggatatcgtcagcatccgagatcttcaaggaaacgataagaagtg ttatacgagacgtccaaggcgcggaaaatctctcggacgatataatcatctatggaaaaacccagaaggaccatgatcga tctcttgaagctgtatttcaagcactacaagaaagtggcctcactctaaacaaggaaaatgacggcatatcaccagaccc taagaaagtgcgagcaataaaggaagcagctccgccaactaactcatctgaattgcgcagcttcctgggtatgacaaatt attcagcacgcttcatcccagataatgcgacgatctgcgaaccgttgcgccgactcacgaaacaagacaacgagtgggaa tggggtgtcgaacaagatcgggcttttgaaagactaaagtcagaactttctagtgataccattatcacatattacaaccc agaatcagaaatcagcattctagttgatgcaagccccgtgggcttaggagcaattatggcacaggatgaaaaagtcgttg catatgctagccgtgctctaaccgatgttgagagccgctatagtcaaactgagagagaagccctagcgattgtatgggcg tgtgaacattttgacatgtacatccgcggagctccttgcgttaacattgtgaccgaccacaaaccactcgagacaatatg gcagaaaccgaaaccgccgcttagaatagaaagatggggactccgtttacagccgtataaactgaaaataagatatgaac caggtcacagtaatccagctgattatatgtcacgtcatccgtgcgcaacgaagaaaaactctcatgaggagaagattgca gagagctacgtaaacttcatcactacaggatccgatccgaaggccatgaccttagatgaagttaaatctgcatccaatga ggataaaactattcagaaagctatagaattcgcgggcaatggcaaatggcacgaaataaagaacaataccgacactgaaa tcgacatcgcagaactacaggcctatcggaatattcgcaatgaactcgtagttcactctgaaaacatattgttgcgggac cataggattgtaatgccttacaaacttcgtaagactgcgatacatattgcacacgagggtcaccaaggccttaccaagac taaagcctttatccggtccaaaatatggttcccgggaattaacgacgaggtggactccgtgatcaaggattgcgctgctt gccaaataaatacaccggctcgatatatggaaccattacatatgtccgaactacccgctcacccatgggacaacctaagt atggacttctgcggaccgctcccgtcgggtgattacttatttgtcatcatcgacgagtattcacgatatcctgttgtaga gattatcctatctctatccgctcacactgttatcccatacatactgtcagaattcggaattccaagcatggttaagtctg acaatcgagcacccttcaactcgcatgcttttaaggaattcgcacaaaacatgggcttcaaacaccgaaagattacgccg ctctggacgagggccaacgcgcaagccgaagcgttcaataaaccgcacatgaaagctgtaaaatcagtccatattgaggg aaggagctggaagcaggaaatgtttcgtttccttcgacagtacagagcaacgcctcatacatcaactgcgtttacgccac acagactcctatttggacgcgaaccgtctaccaaagtacaacggaagaacacacaaaattcggaaataacagaaaaggtc cggcaaaatgacgaacaatcaaaggcaaagatgaaaaacgntgtgcgtttttag |
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Protein
| Protein ID | pfu_aug1.0_11743.1_53731.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11743.1_53731.t1 MQDHKDSTTRAMTDLDARMNFLKARMNEFEEKLEARVATVYAVQEKQTLMKNEMDSRVTVETEKRAQEIATLKQEIEALK QRRDPNPATQQDISNVQASLRKMADSIQTVKTVLGMKIQSEQKLRGDEVQKLQDEIAILRTALEPLVKKPLPRSFIKNPN QRNNQGDDTPDVNRHSVANAYSIAYDRRAYPVALEGSLKVSSHIELSSNKSMETHQYQTSYISQHLATHSTHIERPSNKS MEIHRYQISYISQHLVTHSTHIKRSNTGATVNILDEKTYQSVGTPRLQRKNRQKLQPYGGGRSLHILGTCKLGVESKEKF ECHTFSVVKGNHGAIFGFETAPQLYLVKIVQQIKPATLEVEHKYAHLFEGIGRYKKGKIKLHIDENIKPVAQRYRRTPFH LRSKVEKEIEKLIKEDIIENVTQGRPTPWVSPIVTPPKKNPDEIRLCVDMREANKAILRERHVLPTIDELIYDLNNASEF SKLDLRAGYHQMELEEESKHITTFSTHLGLYRYKRLNFGISSASEIFKETIRSVIRDVQGAENLSDDIIIYGKTQKDHDR SLEAVFQALQESGLTLNKENDGISPDPKKVRAIKEAAPPTNSSELRSFLGMTNYSARFIPDNATICEPLRRLTKQDNEWE WGVEQDRAFERLKSELSSDTIITYYNPESEISILVDASPVGLGAIMAQDEKVVAYASRALTDVESRYSQTEREALAIVWA CEHFDMYIRGAPCVNIVTDHKPLETIWQKPKPPLRIERWGLRLQPYKLKIRYEPGHSNPADYMSRHPCATKKNSHEEKIA ESYVNFITTGSDPKAMTLDEVKSASNEDKTIQKAIEFAGNGKWHEIKNNTDTEIDIAELQAYRNIRNELVVHSENILLRD HRIVMPYKLRKTAIHIAHEGHQGLTKTKAFIRSKIWFPGINDEVDSVIKDCAACQINTPARYMEPLHMSELPAHPWDNLS MDFCGPLPSGDYLFVIIDEYSRYPVVEIILSLSAHTVIPYILSEFGIPSMVKSDNRAPFNSHAFKEFAQNMGFKHRKITP LWTRANAQAEAFNKPHMKAVKSVHIEGRSWKQEMFRFLRQYRATPHTSTAFTPHRLLFGREPSTKVQRKNTQNSEITEKV RQNDEQSKAKMKNXVRF |
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