Gene
| Gene Model ID | pfu_aug1.0_11755.1_46422 |
|---|---|
| Locus | scaffold11755.1 : 6464 ... 15406 : - |
| To GenomeBrowser | scaffold11755.1:6464..15406 |
| Genes list of scaffold | scaffold11755.1 |
| Synonym | pfu_aug2.0_5.1_16668 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11755.1_46422.t1 | 4 | 1 | WD40 | 2 | 25 | 3.4e-29 | 99.6 | 2.0e-08 | 0.0001 | 22.0 |
| pfu_aug1.0_11755.1_46422.t1 | 4 | 2 | WD40 | 31 | 67 | 3.4e-29 | 99.6 | 1.9e-13 | 9.6e-10 | 37.9 |
| pfu_aug1.0_11755.1_46422.t1 | 4 | 3 | WD40 | 72 | 109 | 3.4e-29 | 99.6 | 7.9e-09 | 3.9e-05 | 23.3 |
| pfu_aug1.0_11755.1_46422.t1 | 4 | 4 | WD40 | 123 | 150 | 3.4e-29 | 99.6 | 4.3e-07 | 0.0021 | 17.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11755.1_46422.t1 | gi|156363206|ref|XP_001625937.1| | predicted protein [Nematostella vectensis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 2 |
Transcript
| Transcript ID | pfu_aug1.0_11755.1_46422.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11755.1_46422.t1 tttggggctgttcatggcatacttgtggagattttgtagcatcttgttctatggataacacgtgtaaagtttgggattta cagagtttacgctgccgctatacattaagaggtcacgcagatagcgttaatagtatcgaattccttccctattccaatac actcctcacaagctctgcagataaaacgatgtcactatgggatgctagagctggtctatgtgcacaaacattctatggac atatgcattcagttaaccattgtaccttcaaccttaaaggtgacaccatagcatcatgtgattcctacggtattatcaaa ctatgggacgtacgagccgtagccccgatggtcagctttgaggtgggcccccaccctgccaacagagttgcctttgatcc tacaggggctgtattggccattgctagcaatgatagcactgtaaagatgtacgaagttgctagtggaagggaattaaaga ctaaaacccctatcacacttttacgtatcggcccacgtatctacggcgtatcaggatacgtgacagtaagaaaggaatgc agcagcaacgcagtagcaatgccagcttacgtagcaagtactctttga |
|
Protein
| Protein ID | pfu_aug1.0_11755.1_46422.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11755.1_46422.t1 WGCSWHTCGDFVASCSMDNTCKVWDLQSLRCRYTLRGHADSVNSIEFLPYSNTLLTSSADKTMSLWDARAGLCAQTFYGH MHSVNHCTFNLKGDTIASCDSYGIIKLWDVRAVAPMVSFEVGPHPANRVAFDPTGAVLAIASNDSTVKMYEVASGRELKT KTPITLLRIGPRIYGVSGYVTVRKECSSNAVAMPAYVASTL |
|